Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0064 ATGCCTAATGTTCTCATTACAAGATTAATTGCAAATGCATCATCATTCACACACTTCAACAACAAGGGTACCCTAATCCAATTTGCTTCTCTGCTGCAACAAAAACACTACTGTGCTTCACTTTTTCTCTTCAACTCATGCATTTCTCATACAAGCAACCCCAAAGATGACACCTTTACAGTGTCTTACCTCATCAACTCATGTGGGGTGTCTCCAACATTGGCTATCAAACACTCCCAAAAGATGAATTTTGAAAACCCAGATGGCCCAAATGCTGTCCTTCATCTTCTCAAGAACTATGGCTTCTCCAAAACCCATGTTGCAAAATTTGTGGCTAAATATCCAAGGGTGCTTACTGCAAAAGTAGAGAATAACCTTTTGCCTAAACTCAAGTTCTTTAGTTCCATTGGGGTTTCCAACATTGACATGCCTGAGATGTTAATTGCTAACCCCTTTATCTTTGGAAGGAGCTTGAAAAAGTGTCTCATCCCACGTTACGAGATCCTAAAGAGTGTAGTTTGTGATGATAAGGAGGTTGTTAGAACTTTGAAAAAATCAGCATATGCTTTTACATATTGTAACGTAAGGAATATTTTGGTTCCAAACATTGAGATTTTGAGGCAATGTGGTGTGCCTCAAGCTTCAATCTCTCTATTGATGGCACATTATCCGCGTGTAGTGTATTGTAAGCATTCCAGATTTGTTGAAGCTGTCAAGAAAGTTGAGCAAATTGGGTTTGATGCTTTGAAAACAACTTTTGTATTTGCCCTTCAAGTGCTTTTAACAATGAGTAAAGAGGTTTGGGAATCAAGAATTGAGGTTTATGAGAAGTGGGGTTGGAGCCATGATATGGCAATTCAAGCATTTAGGACATTTCCCAATTTTATGAAGTTGTCTGAGGAGATGGTTACAAAGAAAATGAGTTTCCTGGTGAAGGATATGGGTTTGCCATCAGAAGTTATTGCTAAACGGCCTCAGATTCTAGCCTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCAGTAATTAAAATCTTGCAATCAAAAGGTCTGTTTGAGAATAATTTGTCCATAGGTTCCCTAATGTCCCTAACAGAGGAAAAATTTTTGAAGAAATTTGTCATCAATTTTCAGCAAGATTTTCCTCACTTACCAGATGTCTACCAAGATAATTTGATTAATCGTCAGAATGTTCTTTGA 1200 0.3783 MPNVLITRLIANASSFTHFNNKGTLIQFASLLQQKHYCASLFLFNSCISHTSNPKDDTFTVSYLINSCGVSPTLAIKHSQKMNFENPDGPNAVLHLLKNYGFSKTHVAKFVAKYPRVLTAKVENNLLPKLKFFSSIGVSNIDMPEMLIANPFIFGRSLKKCLIPRYEILKSVVCDDKEVVRTLKKSAYAFTYCNVRNILVPNIEILRQCGVPQASISLLMAHYPRVVYCKHSRFVEAVKKVEQIGFDALKTTFVFALQVLLTMSKEVWESRIEVYEKWGWSHDMAIQAFRTFPNFMKLSEEMVTKKMSFLVKDMGLPSEVIAKRPQILAYNLEKRIIPRFSVIKILQSKGLFENNLSIGSLMSLTEEKFLKKFVINFQQDFPHLPDVYQDNLINRQNVL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0064 399 SMART mt_12 251 281 IPR003690 GO:0003690|GO:0006355
Apr2g0064 399 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Apr2g0064 399 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Apr2g0064 399 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Apr2g0064 399 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Apr2g0064 399 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Apr2g0064 399 Coils Coil 395 399 - -
Apr2g0064 399 Gene3D Transcription termination factor 3, mitochondrial 157 383 IPR038538 -
Apr2g0064 399 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 36 391 - -
Apr2g0064 399 Pfam mTERF 94 248 IPR003690 GO:0003690|GO:0006355
Apr2g0064 399 Pfam mTERF 260 370 IPR003690 GO:0003690|GO:0006355
Apr2g0064 399 PANTHER CGI-12 PROTEIN-RELATED 36 391 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0064 Apr-Chr2 1012112 1013311 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0064 mTERF 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0064 K15032 - gmx:100786641 469.544