Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0063 ATGGTTCCTAATTTTCACATTGCAAGATTAACTGCATCATTCTTACACTGCAACAAAGGTACCCAAATTCGATTGGATTCTTTTCTGCAATACAAACACAATGCTTTCCTTTTATTCTTCAACTCATTCACTTCAACCACCTCTTCTGGCTCTGAATCTGATGGAAACCTTCATAAAGGTGACACCTTTACAGTGTCTTACCTCGTCAACTCATGTGGGGTGTCCCCAACATTGGCTATGAAACTCTCCCATAGGGTGAATATCAAAAACCCAGATGGCCCAAATGCTGTTCTTGATCTTTTCAACAACTATGGCTTCTCCAAAACCCATTTTGCAAAATTTGTGGCTAAATTTCCAAGGGTGCTCAATGCAAATGCTGAGAACATCCTTTTGCCTAAATTCAAGTTCTTCCGTTCTATTGGTGTTTCAAACGCCGATATGCCTAGGATCCTAATTGATAACCACATTATCTTGGCTAGAAGCTTGGAAAAATGCCTCATCCCACGTTATGAGGTACTTAGGGGTATAGTTCGTGATAATCAAGAAGTTGTTAGAGCTTTGAAAAGTGCCCCATTTGGTTTTACATTTGCTAATATGGTGAATGACTTGGTTCCAAACATCGAGGTTTTGAGGCAATTTGGTGTGCCTCAAGCTTCCATTTCTCTCTTGATGATGCATTGTGGAACTGCACCGTATGCAAAGCATCCCAGATTTGTGGAAGCTTTCAACACTGCTAAGGAAATTGGGTTTAATCCTTTGAAAGCAACTTTTGTTGTGGCTATTGAAATGCTTATTAGGAGCAAAGAAGCGCGGGAATCAAAGTTTAAGGTTTATGAGAGGTGGGGCTGGAACCGCGAAATTGCTCTTCGGGCATTTAGAAAGTTTCCTTGTTTTATGAAGTTGTCAGAGGAGATGTTTGCCAAAAAAATGAATTTCCTTGTGAAGGATATGGGTTGGTCATCAGAAGATATTGCTGATTATCCTCAAGTTCTAGCTTACAACTTTGAGAAGAGGATTGTACCTAGATTCTCAGTAATTAAAATCTTGAAATCCAGAGGTCTGCTTGAGAATAGTTTCCGCTTTAGTTCTTTTATTTGCTTAAATGAGGAAAATTTTTTGCAGAAATTTGTTGTCAATTTTCAGAAAGATTTGCCTCTCTTACCTGGTGTCTATAGAGATGTGATCAATCATTTGAATGTAATGTAG 1206 0.3881 MVPNFHIARLTASFLHCNKGTQIRLDSFLQYKHNAFLLFFNSFTSTTSSGSESDGNLHKGDTFTVSYLVNSCGVSPTLAMKLSHRVNIKNPDGPNAVLDLFNNYGFSKTHFAKFVAKFPRVLNANAENILLPKFKFFRSIGVSNADMPRILIDNHIILARSLEKCLIPRYEVLRGIVRDNQEVVRALKSAPFGFTFANMVNDLVPNIEVLRQFGVPQASISLLMMHCGTAPYAKHPRFVEAFNTAKEIGFNPLKATFVVAIEMLIRSKEARESKFKVYERWGWNREIALRAFRKFPCFMKLSEEMFAKKMNFLVKDMGWSSEDIADYPQVLAYNFEKRIVPRFSVIKILKSRGLLENSFRFSSFICLNEENFLQKFVVNFQKDLPLLPGVYRDVINHLNVM* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0063 401 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 34 392 - -
Apr2g0063 401 Pfam mTERF 98 303 IPR003690 GO:0003690|GO:0006355
Apr2g0063 401 Pfam mTERF 263 372 IPR003690 GO:0003690|GO:0006355
Apr2g0063 401 PANTHER CGI-12 PROTEIN-RELATED 34 392 IPR003690 GO:0003690|GO:0006355
Apr2g0063 401 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Apr2g0063 401 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
Apr2g0063 401 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Apr2g0063 401 SMART mt_12 184 216 IPR003690 GO:0003690|GO:0006355
Apr2g0063 401 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Apr2g0063 401 Gene3D Transcription termination factor 3, mitochondrial 178 384 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0063 Apr-Chr2 1003884 1005211 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0063 mTERF 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0063 K15032 - gmx:100777030 541.962