Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0062 ATGGTTCCTAATTTTCTGATTACAAGATTAACTGCAACTGCATCATCATTCACACACTACAACTATAAGGGAACCCTAATCCTATTGGGTTCTCTTCTGTTACACAGACGCAATGCTTCACTTTATCTCTTCAGATCATTCACTTCTGATACAAACAACAGTAAAGGGGTCACCTTTACGGTGTCTTACCTCGTAAACTCATGTGGGGTGTCCCCAGAATTGGCTAAGAAACTCTCCAAAAATGTGCATTTGAAAAACCCAGATGGTCCAAATGCTGTTCTTGATCTTCTCAAGACCTATGGGTTCTCCAAAACCCATGTTGCAAATCTTGTGGCTAAATATCCAAGAGTGCTTGCTGCAAGAGCAGATAATACCCTTTTGCCTAAACTCAAGTTCTTTCATTCTGTTGGGGTTTCCAACACTGACATGCCTAAGATCATAATCCGTAACTACCTTATTTTGCGGAGAAGTTTGGAAAAGTGCCTCATCCCACGTTATGAGTTACTTAGAAGTTTAGTTCGCAGTGACGAGGAAGTTGTTAGAGTTCTGATAAGAGACCCATTTGGTTTTATATATTGTGACCCAAGGAATGATTTAGTTCGAAACATTGAGGTTTTGAGGCAATGTGGTGTGCAACAAGCTCACATTTCTCTCCTTGTGGTCCGTTGTCCCTCCGCGTTAAATGCAAAGCATTTCAAATTTGTGGAAGCTATCAAGATAGTTAAGGAAATTGGGTTTGATCCTTCGAAATCAACTTTTGTCCAGGGTCTCCTAGTGTTTATATATATGAGTAAAGCGAAATGGGAGTCGACGTTTGAGGTTTATGAGAGGTGGGGCTGGGACCGTGAAATGGTCCTTTGTGCATTTAGAAAGTTTCCCAATTTTTTCAATTTGTCAGAGAAGTTGATTACCGAAAAAATGAATTTTCTAGTGAATGATATGGGTTTGGCATCAGAAAAAATTGCTGAATATCCTTCAATTCTGGCCTACAACTTGAAGAAGAGGATTATCCCTAGATTCTCAGTATTTAAAATCTTGATATCTAAAGGTCTGCTGAAGAACAACTTGCACTTCAGTTCCTTCATATGCTTAAGTGAGGAAAACTTTTTGAAGAAATTTGTCAACAACTTTCAGAAAGATTTGCCTCATTTACTGGGTGACTACACAGATTTGATCAATTGTGAGAATGTGATATAG 1197 0.3885 MVPNFLITRLTATASSFTHYNYKGTLILLGSLLLHRRNASLYLFRSFTSDTNNSKGVTFTVSYLVNSCGVSPELAKKLSKNVHLKNPDGPNAVLDLLKTYGFSKTHVANLVAKYPRVLAARADNTLLPKLKFFHSVGVSNTDMPKIIIRNYLILRRSLEKCLIPRYELLRSLVRSDEEVVRVLIRDPFGFIYCDPRNDLVRNIEVLRQCGVQQAHISLLVVRCPSALNAKHFKFVEAIKIVKEIGFDPSKSTFVQGLLVFIYMSKAKWESTFEVYERWGWDREMVLCAFRKFPNFFNLSEKLITEKMNFLVNDMGLASEKIAEYPSILAYNLKKRIIPRFSVFKILISKGLLKNNLHFSSFICLSEENFLKKFVNNFQKDLPHLLGDYTDLINCENVI* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0062 398 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 44 389 - -
Apr2g0062 398 Pfam mTERF 197 370 IPR003690 GO:0003690|GO:0006355
Apr2g0062 398 Pfam mTERF 94 310 IPR003690 GO:0003690|GO:0006355
Apr2g0062 398 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Apr2g0062 398 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Apr2g0062 398 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Apr2g0062 398 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Apr2g0062 398 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Apr2g0062 398 Gene3D Transcription termination factor 3, mitochondrial 152 381 IPR038538 -
Apr2g0062 398 PANTHER CGI-12 PROTEIN-RELATED 44 389 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0062 Apr-Chr2 994892 996088 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0062 mTERF 3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0062 K15032 - gmx:100813396 468.388