Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0061 ATGGTTCCTATTGTTATGATTACAAGATTAACTGCAACTGCATCATCATTCACACACTACAACAATAAGGGTACCCTAATTCCATTGGGCTCTCTTCTGCAACACAAACACAATGCTTTCCTTTCATTCCTCAACTCGTTCGCTTCATCCACCTCTTCTGATTCTGAATCAGATAAAAACTACCATAAAGGTGACACCTTTACAGTGTCTTACCTCGTTAACTCATGTGGGGTGTCCCCGGAATTGGCTAAGAAACTCTCCAAAAATGTGCATTTGAAAAACCAAGATGGCCCAAATGCTGTTCTTGATCTTCTCAAGACCTATGGGTTCTCCGAAACCCATGTTGCAAATCTTGTGGCTAAAAATCCGAAGGTGCTTACTGCAAAGGCAGATAATACCTTTTTGCCTAAACTAAAGTTCTTTCGTTCCATTGGGGTTTCCAACACTGACATGCCTAAGATCATAATCCGTAACTACATTATTTTGTGGAGAAGTTTGGAAAAGCGCCTCATCCCACGTTATGAGTCACTTAGAAGTGTAGTTTGCAGTGACGAGGAAGTTGTTAGAGTTTTGAGAAGGGGCCAATTTACTTTTGGATATTCTGACATGAGGAATGATTTGGTTCGAAACATTGAGGTTTTGAGGCAATGTGGTGTGCCACAACCTTCCATTTCTCTCCTTGTGATCCATTATCCCTTCGCCCCGAATGCGAAGCATTCTGAATTTGTGGAAGCTGTCAAGATAGTTGAGGAAATTGGGTTTGATCCTTTGAAAACAACTTTTGTCCAAGCTGTCCAAGTGCTTTTAGGTCTGACTAAAGCAAAATGGGAGTCGAAATTTGAGGTTTATGAGAGGTGGGGCTGGGACCGCAAAATGGCCCTTCGAGCATTTAGAAAGTTTCCCAATTTTATGAAATTGTCAGAGACGGTGATTGCAAAAAAAATGAATTTTCTGGTGAATGATATGAGTTTGGCATCAGAAGACATTGCTGATTATCCTCCAATTCTGGCCTACAGCTTGAACAAGAGGATTATCCCTAGATTCTCAGTAGTTAAAATCTTGACATCGAAAGGTCTGCTTAAGAATAATTTGCACTTTAGTTCCTTCTTATGGTTAAGTGAGGAAAAGTTTTTGAAGAAATTTGTCAACAATTTTCAGAAAGATTTGCCTCATTTAAAAGATGACTACACAGATTTGATCAATTGTGAGAATGTGATATAG 1221 0.3956 MVPIVMITRLTATASSFTHYNNKGTLIPLGSLLQHKHNAFLSFLNSFASSTSSDSESDKNYHKGDTFTVSYLVNSCGVSPELAKKLSKNVHLKNQDGPNAVLDLLKTYGFSETHVANLVAKNPKVLTAKADNTFLPKLKFFRSIGVSNTDMPKIIIRNYIILWRSLEKRLIPRYESLRSVVCSDEEVVRVLRRGQFTFGYSDMRNDLVRNIEVLRQCGVPQPSISLLVIHYPFAPNAKHSEFVEAVKIVEEIGFDPLKTTFVQAVQVLLGLTKAKWESKFEVYERWGWDRKMALRAFRKFPNFMKLSETVIAKKMNFLVNDMSLASEDIADYPPILAYSLNKRIIPRFSVVKILTSKGLLKNNLHFSSFLWLSEEKFLKKFVNNFQKDLPHLKDDYTDLINCENVI* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0061 406 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 37 397 - -
Apr2g0061 406 Gene3D Transcription termination factor 3, mitochondrial 161 389 IPR038538 -
Apr2g0061 406 Pfam mTERF 268 378 IPR003690 GO:0003690|GO:0006355
Apr2g0061 406 Pfam mTERF 102 315 IPR003690 GO:0003690|GO:0006355
Apr2g0061 406 SMART mt_12 326 360 IPR003690 GO:0003690|GO:0006355
Apr2g0061 406 SMART mt_12 152 183 IPR003690 GO:0003690|GO:0006355
Apr2g0061 406 SMART mt_12 116 147 IPR003690 GO:0003690|GO:0006355
Apr2g0061 406 SMART mt_12 259 289 IPR003690 GO:0003690|GO:0006355
Apr2g0061 406 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Apr2g0061 406 PANTHER CGI-12 PROTEIN-RELATED 37 397 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0061 Apr-Chr2 982876 984812 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0061 mTERF 4.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0061 K15032 - gmx:100786641 481.87