Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0059 ATGGTTCCTAATTTTCTGATTATAAGATTTACTGCAACTGCATATGCATCATCATTCACACACTACAACAATAAGGGAACCCAAATCCTATTGGGTTCTCTTCTGCTACACAAACACAATGCTTCACTTCATCTTTTCAGATCATTCACCTCTGATATAAACAACCATAAAGGTGACACCTTTACTGTGTCTTACCTCGTAAACTCATGTGGGGTGTCCCCAGAATTGGCCAAGAAACTCTCCATAAAGGTGCATTTGAAAAACCCAGATGGCCCAAATGCTGTTCTTGATCTTCTCAAGGCCTATGGGTTCTCCAAAACCCATGTTGCAAATCTTGTGGCTAAATATCCAGAGGTGCTTACTGCAAAGGCCGATAATACCCTTTTGCCTAAACTCAAGTTCTTTCATTCTGTTGGAGTTTCCAACACTGACATGCCTAAGATTATAATCCGTAACTACCTTATTTTGCGGAGAAGTTTGGAAAAGTGCCTCATCCCACGTTACGAGTTACTTAGAAGTGTGGTTCGCAATGATGAGGAAGTTGTTAGAGTTTTGAGAAGCGACCCATTTGGTTTTACATATTGTGAAACAAGGAATCATTTGGTTCGAAACATTGAGGTTTTGAGGCAATGTGGTGTGCCACAAGCTTCCATTTCTCTCCTTGTGGTCCATTTTCCCTCCGTGTCCAATGCAAAGCATTCCAAATTTGTGGAAGCTATAAAAATAGTTGAGGAAATTGGGTTCGATCCTTTGAAAACATCTTTTGTCCAGGGTCTCCAAGTGCTTTTACATCTGAGTAAAGTGAGATGGGAGACGAAATTTGAGGTTTATGAGAGGTGGGGCTGGGACCGCGAAATGGCCCTTCGAGCATTTATAAAGTTTCCCACTTTTATGGCTTTGTCAGAGAAGATAGTTACGGAAAAAATGAATTTTCTAGTGAATGATATGGGTTTGACATCAGAAAATATTGCTGAATATCCTCCAATTCTGGCCTACAACTTGAAGAAGAGGATTATCCCTAGATTCTCAGTAATTAAAATCTTGGTATCTAAAGGTCTGCTTGAGAATAACTTGCACTTCAGTTCCTTCATATGCTTAAGTGAGGAAAAGTTTTTGAAGAAATTTGTCAACAACTTTCAGAAAGATTTGCCTCATTTACAAGATGTATACACAGATTTGATCAATTGTGAGAATGTGATATAG 1203 0.3915 MVPNFLIIRFTATAYASSFTHYNNKGTQILLGSLLLHKHNASLHLFRSFTSDINNHKGDTFTVSYLVNSCGVSPELAKKLSIKVHLKNPDGPNAVLDLLKAYGFSKTHVANLVAKYPEVLTAKADNTLLPKLKFFHSVGVSNTDMPKIIIRNYLILRRSLEKCLIPRYELLRSVVRNDEEVVRVLRSDPFGFTYCETRNHLVRNIEVLRQCGVPQASISLLVVHFPSVSNAKHSKFVEAIKIVEEIGFDPLKTSFVQGLQVLLHLSKVRWETKFEVYERWGWDREMALRAFIKFPTFMALSEKIVTEKMNFLVNDMGLTSENIAEYPPILAYNLKKRIIPRFSVIKILVSKGLLENNLHFSSFICLSEEKFLKKFVNNFQKDLPHLQDVYTDLINCENVI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0059 400 Pfam mTERF 262 372 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 Pfam mTERF 96 306 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 PANTHER CGI-12 PROTEIN-RELATED 39 392 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 SMART mt_12 182 214 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 SMART mt_12 320 354 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 SMART mt_12 110 141 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 SMART mt_12 219 249 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 SMART mt_12 253 283 IPR003690 GO:0003690|GO:0006355
Apr2g0059 400 Gene3D Transcription termination factor 3, mitochondrial 155 383 IPR038538 -
Apr2g0059 400 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 39 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0059 Apr-Chr2 947978 949180 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0059 mTERF 2.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0059 K15032 - gmx:100813396 502.286