Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0058 ATGGTTTCTAATTTTCTGATTACAAGATTCACTGCAACTGCATCATCATTCACACACTACAACATTAATAAGGGTACCCTACTTCCATTGAGTTGTCTTCTGCATCACAAACACAATGCTTTCCTTTTATTCCTCAACTCGTTCGCTTCATCCACCTCTTCTGATTCTGAATCAGATCAACACTACCGTAAAGGTGACACGTTTACAGTGTCTTACCTCGTAAACTCATGTGGGGTGTCCACAGAATTGGCTACGAAACTCTCCAAAAAAGTGCATTTGAAAAACTCATATGGCCCAAATGCTGTTCTTGATCTTTTCAAGACCTATGGGTTCTCCGAAACCCATGTTGCCAAACTTGTGGCTAAATGTCCAAAGGTGCTGGCTGCAAAGGCAGAGAAAACCCTTTTGCCTAAACTCAAGTTCTTTCATTCCATTGGTGTTTCCAACATTGACATGCCTAGGGTCATAATTGGTAACTACACTATCCTGGGCAGAAACTTGGAGAAGTGCATCATCCCACGTCATGAGGTACTTAGAAGCGTAGTTCGCGATGATGAGGAAGTTGTTAAAGTTTTGAGAAAAGGCCCATATTCCTTTACATATTTTGTCACAAAGAGTGGTTTCGTTCGAAACATTGAGGTTTTGAGGCAACGTGGGGTGCCACAAGCTTCCATTTCTCTCCTTGTGATCCATTTTACCTTTGCCTCGAATGCGAAGCATTCCAAATTTGTGGAAGCTATCAAGATAGTTGAGGAAATTGGGTTTGATCCTTTGAAAACAGCTTTTGTCCAAGCTGTCCATGTGCTTTTAACTCTGAGTAGAGCGACATGGGAGTCGAGATTTGAGGTTTATGAGAGGTGGGGCTGGGACCGCGAAATGGCATTTGGAGCGTTTAGAAAGTTTCCCAATTTTATGATTTTGTCGGAGAAGATGTTTACAAAAAAAATGAATTTTCTAGTGAAGGATATGGGTTTGTCATCAGAATATATTGTTGAATATCCTCAAGTTGTAGCCTACAGCTTGGAGAAGAGGATTATACCTAGAATCTCAGTCATAAAAATCATGAAATCAGATGATTTTCTTGAAAATAGTTTTCACTTTGGTTCCTTTATATGCATAACTGAGGAAAACTTCTTGGAGAAATTTGTCATCAACTTTCAGAAAGAGTTGCCTCCCTTACCAGATGCCTGCAGAAATTTGATCAATCGTAAGAATGTTATGTAA 1224 0.3987 MVSNFLITRFTATASSFTHYNINKGTLLPLSCLLHHKHNAFLLFLNSFASSTSSDSESDQHYRKGDTFTVSYLVNSCGVSTELATKLSKKVHLKNSYGPNAVLDLFKTYGFSETHVAKLVAKCPKVLAAKAEKTLLPKLKFFHSIGVSNIDMPRVIIGNYTILGRNLEKCIIPRHEVLRSVVRDDEEVVKVLRKGPYSFTYFVTKSGFVRNIEVLRQRGVPQASISLLVIHFTFASNAKHSKFVEAIKIVEEIGFDPLKTAFVQAVHVLLTLSRATWESRFEVYERWGWDREMAFGAFRKFPNFMILSEKMFTKKMNFLVKDMGLSSEYIVEYPQVVAYSLEKRIIPRISVIKIMKSDDFLENSFHFGSFICITEENFLEKFVINFQKELPPLPDACRNLINRKNVM* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0058 407 Pfam mTERF 268 378 IPR003690 GO:0003690|GO:0006355
Apr2g0058 407 Pfam mTERF 103 284 IPR003690 GO:0003690|GO:0006355
Apr2g0058 407 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 37 396 - -
Apr2g0058 407 Gene3D Transcription termination factor 3, mitochondrial 184 390 IPR038538 -
Apr2g0058 407 PANTHER CGI-12 PROTEIN-RELATED 37 396 IPR003690 GO:0003690|GO:0006355
Apr2g0058 407 SMART mt_12 153 184 IPR003690 GO:0003690|GO:0006355
Apr2g0058 407 SMART mt_12 327 358 IPR003690 GO:0003690|GO:0006355
Apr2g0058 407 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Apr2g0058 407 SMART mt_12 260 290 IPR003690 GO:0003690|GO:0006355
Apr2g0058 407 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Apr2g0058 407 SMART mt_12 189 221 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0058 Apr-Chr2 936127 938562 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0058 mTERF 5.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0058 K15032 - gmx:100786641 474.937