Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0057 ATGGTTCCTAATTTTCTGATTACAAGATTAACTGCAACTGCATCATCATTCACACACTACAACTATAAGGGAACCCTAATCCTATTGGGTTCTCTTCTGTTACACAGACGCAATGCTTCACTTTATCTCTTCAGATCATTCACTTCTGATACAAACAACAGTAAAGGGGTCACCTTTACGGTGTCTTACCTCGTAAACTCATGTGGGGTGTCCCCAGAATTGGCTAAGAAACTCTCCAAAAAAGTGCATTTGAAAAACCCAGATGGCCCAAATGCTGTTCTTGATCTTCTCAAGACCTATGGGTTCTCCAAAACCCATATTGCAAATCTTGTGGCTAAATATCCCATGGTGTTTGCTATAAAGGTAGAGAGTACCCTTTTGCCTAAACTCAAGTTTCTTCGTTCTATCGGGGTTTCCGACACTGATATGCCTAAGATCCTAATTGCTAACTATGATATCTTGCGCAGAAGTTTGGAAAAGTGTCTCATCCCACGTTATGAGGTGCTTAGAAGCATAGTTCGCGATGATGATGAAGTAGTTAAAGTTTTGAGAAATGCCCCATTTTCGTTTACATATTGTGACATAAGGAAGCATTTCGTTCGAAACATTGAGGCTTTGAGGCAATGTGGCGTGCCACAAGCTTCCATTTCTCTCTTTGTGATCCATTTTTCCTGCGCACCATTTGCGAATCATTCCAGATTTGTGGAAACTACCAAGATAGTTGAGGAAATTGGGTTTGATCCTTTGAAAACAACTTTTGTCCATGCTGTCAAAGTGCTTTTATATCTAAGTAAAGCCAATTGGGAGTCTAGATTTAAGGTTTATGAGAGGTGGGGCTGGGACCGCGAAATGGTCTTTCAAGCATTTAGAAAGTTTCCCAGTTTTCTCAATTTGTCAGAGGAAATGGTTACAAAAAAAATGAATTTTCTAGTAAATGATATGGGTTTGGCATCAGAAGATATTGCTGAATATCCTGCAATTCTGGCCTACAGCTTGGAGAGGAGGATTATCCCTAGATTCGCGGTAGTTAAAATCTTGATATCTAAAGGTCTGCTTGTGAATAATTGGCACTTCAATTCCCTCTTATGGTTAAATGAAGAAAAGTTTTTGAAGAAATTTGTCAACAACTTTCAGAAAGATTTGCCCCATTTACAAGATGTCTACACAGATTTGATCAATTGTCAGAATGTGATGTAG 1197 0.3901 MVPNFLITRLTATASSFTHYNYKGTLILLGSLLLHRRNASLYLFRSFTSDTNNSKGVTFTVSYLVNSCGVSPELAKKLSKKVHLKNPDGPNAVLDLLKTYGFSKTHIANLVAKYPMVFAIKVESTLLPKLKFLRSIGVSDTDMPKILIANYDILRRSLEKCLIPRYEVLRSIVRDDDEVVKVLRNAPFSFTYCDIRKHFVRNIEALRQCGVPQASISLFVIHFSCAPFANHSRFVETTKIVEEIGFDPLKTTFVHAVKVLLYLSKANWESRFKVYERWGWDREMVFQAFRKFPSFLNLSEEMVTKKMNFLVNDMGLASEDIAEYPAILAYSLERRIIPRFAVVKILISKGLLVNNWHFNSLLWLNEEKFLKKFVNNFQKDLPHLQDVYTDLINCQNVM* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0057 398 Gene3D Transcription termination factor 3, mitochondrial 153 381 IPR038538 -
Apr2g0057 398 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 44 390 - -
Apr2g0057 398 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Apr2g0057 398 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Apr2g0057 398 SMART mt_12 251 281 IPR003690 GO:0003690|GO:0006355
Apr2g0057 398 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Apr2g0057 398 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Apr2g0057 398 SMART mt_12 180 212 IPR003690 GO:0003690|GO:0006355
Apr2g0057 398 PANTHER CGI-12 PROTEIN-RELATED 44 390 IPR003690 GO:0003690|GO:0006355
Apr2g0057 398 Pfam mTERF 94 304 IPR003690 GO:0003690|GO:0006355
Apr2g0057 398 Pfam mTERF 259 370 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0057 Apr-Chr2 932428 933624 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0057 mTERF 8.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0057 K15032 - gmx:100786641 469.544