Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0056 ATGGATCATTTTCTTACTGCTAGATTAGCTTCGAGGAACCTCAATATTGTTGTTTTATGTCACAATGCTTTTCTTTTCTTCACTTCACGTACTCGATCTATATCAAACACCATTCACCATAAAGGTGGAAACTTTGATGTTTATAGCCTCATAAACTTGTGTGAGTTGTGCCCTGAAATGGCCCTTAAACTCTTAAAAAGGTTGCAATTGAAAAACCCAGATGGGTCAAATGCTACAGTTGATCTTCTCAGAAACTATGGATTCTCTGAGACCCAGCTGTGTCGTCTTGTAAAGAGACAACCTTCTGTGCTTTTGTCAAAAAAACTCAAGTTCTTGCATTCTATTGGGTTTTCAACCACGGATCTACCCAAAATCCTCATTGGAAACACTTCAATTTTGGGATTAAGCTTGACCAAAACCATTATCCCTCGTTACAAGATCATTAGGAGTCTAGTTTCCAATGATAAGGAAGCAGTTTCCACTCTGAAGCATGGGTTGTGGTTCTTTAACAGAAGAAATGGAATGGATGATTCAGTTTCAAACATAGAGGTCTTGAGACAACTTGGGGTGCCTCAAAGTTCCATTTCCCTATTAGTGACAAATTTTCCTACTGTGGCATTTATGAAGCATTTGAGATTTGTTACGGCTGTGAATAAAGTGAAGGAAATGAGGTTTGATCCTTTGAAGTCAAATTTTCTTTTGGCTGTTCAAGTGCTTACAAAGATGAATGAAGTAATGTGGAAATCAAAATTAGAGATTTTTGAGAAGTGGGGCTGGTCCAGAGATATGTGTCTTACAGCTTTCAAAAGTCATCCTCATTATATAATGGCTTCTGAAAAGAAGATAACAAAAGTACTGAGCTTCTTGGCGAAGGATATGGGTTTGCCCCTAGAAGACATTTGCCCCGCAATTTTTAATAACAATTTGGAGAAGACAGTTATTCCTAGATTTGCTGTTGTTAAAATTTTGAAGTCTAGGGGTTTGGTAAAGAGTGATTTAAAATTAAGTAGCTTTGTTCGGATCAGTGAGAAAGTGTTTTTGGAGAGATATGTGACACGATTTCAGAAAATTGCGCCACTACTATTTAAAGGAACATAA 1098 0.3716 MDHFLTARLASRNLNIVVLCHNAFLFFTSRTRSISNTIHHKGGNFDVYSLINLCELCPEMALKLLKRLQLKNPDGSNATVDLLRNYGFSETQLCRLVKRQPSVLLSKKLKFLHSIGFSTTDLPKILIGNTSILGLSLTKTIIPRYKIIRSLVSNDKEAVSTLKHGLWFFNRRNGMDDSVSNIEVLRQLGVPQSSISLLVTNFPTVAFMKHLRFVTAVNKVKEMRFDPLKSNFLLAVQVLTKMNEVMWKSKLEIFEKWGWSRDMCLTAFKSHPHYIMASEKKITKVLSFLAKDMGLPLEDICPAIFNNNLEKTVIPRFAVVKILKSRGLVKSDLKLSSFVRISEKVFLERYVTRFQKIAPLLFKGT* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0056 365 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 27 362 - -
Apr2g0056 365 PANTHER CGI-12 PROTEIN-RELATED 27 362 IPR003690 GO:0003690|GO:0006355
Apr2g0056 365 Pfam mTERF 81 290 IPR003690 GO:0003690|GO:0006355
Apr2g0056 365 Pfam mTERF 242 347 IPR003690 GO:0003690|GO:0006355
Apr2g0056 365 Gene3D Transcription termination factor 3, mitochondrial 57 175 IPR038538 -
Apr2g0056 365 Gene3D Transcription termination factor 3, mitochondrial 176 357 IPR038538 -
Apr2g0056 365 SMART mt_12 94 118 IPR003690 GO:0003690|GO:0006355
Apr2g0056 365 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Apr2g0056 365 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Apr2g0056 365 SMART mt_12 297 329 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0056 Apr-Chr2 926195 927428 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr2g0056 mTERF 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0056 K15032 - gmx:106799612 468.003