Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0045 ATGGGGATTCAAACGATGGGTTCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCTTCTTTGTCTAGGCAAGGTTCATGGTATAGTCTCACTCTTGATGAGGTTAATAGTCAATTAGGAGATATGGGGAAGCCATTGGGGAGTATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGCAAGTCTGTGATTGGCAGTGTGGAAAGCGAGAACATGTCGTCGTCGTCTTCCCTTCAACGGCAGGCCAGCCTTACGTTGGCCCGCGCGTTGAGTGGGAAGACGGTGGACGATGTGTGGAGGGAAATTCAGCAAGGACAGAAGAAAAGTCCAGCTGCAGGGTTGGACACAATGGATTCCCCTGTGCCTCAAGGTTTTCAACAGAAAATAGGCCTGTCATCCTCCCCTTCAATTGGCAGTTTATCCGACTCGAGACCGGGCCGGAAAAGGGATGCTCCTGATGCATATGAGAAAACTCTGGAAAGGAGATTGAGAAGGAAAATCAAGAACAGGGAATCTGCTGCCCGGTCCCGAGCTCGAAAACAGGCTTACCATAATGAACTGGTCAACAAGGTTTCCCGTTTAGAAGAAGAAAATGTAAAGCTCAAGAAAGAGAAGGAGTTTGAAGAAAAGTTACCGCCCGATACATTGCCTGAACAAAAATATCAGCTTAGAAGAATAAATTCTGCCTCATTCTGA 711 0.4669 MGIQTMGSQGNGQQSHLQPSSLSRQGSWYSLTLDEVNSQLGDMGKPLGSMNLDELLQNVWTAEASKSVIGSVESENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKSPAAGLDTMDSPVPQGFQQKIGLSSSPSIGSLSDSRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVNKVSRLEEENVKLKKEKEFEEKLPPDTLPEQKYQLRRINSASF* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0045 236 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 114 IPR043452 GO:0003700|GO:0045893
Apr2g0045 236 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 114 233 IPR043452 GO:0003700|GO:0045893
Apr2g0045 236 Gene3D - 164 216 - -
Apr2g0045 236 MobiDBLite consensus disorder prediction 108 186 - -
Apr2g0045 236 Pfam bZIP transcription factor 166 211 IPR004827 GO:0003700|GO:0006355
Apr2g0045 236 SUPERFAMILY Leucine zipper domain 166 212 IPR046347 GO:0003700|GO:0006355
Apr2g0045 236 MobiDBLite consensus disorder prediction 1 23 - -
Apr2g0045 236 MobiDBLite consensus disorder prediction 148 172 - -
Apr2g0045 236 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 209 IPR004827 GO:0003700|GO:0006355
Apr2g0045 236 CDD bZIP_plant_BZIP46 166 203 - -
Apr2g0045 236 SMART brlzneu 162 234 IPR004827 GO:0003700|GO:0006355
Apr2g0045 236 Coils Coil 182 216 - -
Apr2g0045 236 PANTHER BZIP TRANSCRIPTION FACTOR 114 233 - -
Apr2g0045 236 PANTHER BZIP TRANSCRIPTION FACTOR 35 114 - -
Apr2g0045 236 MobiDBLite consensus disorder prediction 208 236 - -
Apr2g0045 236 MobiDBLite consensus disorder prediction 125 146 - -
Apr2g0045 236 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0045 Apr-Chr2 743826 750861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0045 21 236 bZIP Transcription Factor Family AT3G56850 43.310 1.56e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr2g0045 bZIP_1 3.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0045 K14432 - gmx:100798549 355.14