Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0035 ATGGGAAACACTTGTGGGAAACCAGTTGCTCATGTATCTTCCTCCAATTTTGCTGGAAATAAGAAGCCTGTAAGTAAGTCAAAGCAGTATTCAAATTCTTCTGAGAAAAAAGCTGCTTCAGAATCAAATTTTGACAAATCCATCTCCAATAAGCTCAAGCCCTTCAGCTTGAATGATCTGAAGGAGGCCACGAAGAACTTCCGGCGCGAAAATTTAATCGGAGAGGGAGGATTCGGGCGTGTCTTCAAGGGATGGATTGATGAGAACACATATGCTCCCACAAAAGCAGGCAGTGGAATTGTTGTGGCCATTAAAAATCTGAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTACCTAGGACAGCTTCACCATGAAAATTTGGTGAAACTTATTGGTTATTGCTTGGAAGGTAAAAACAGGCTTCTGGTTTATGAGTTCATGCAAAAAGGAAGTTTGGAGAATCACTTATTCAGAAAGGGTGTTCAACCTATGGCCTGGGTTACAAGGGTCAACATTGCAATTGGTGTTGCAAGAGGATTAACATTCTTACATTCCCTGGATGCAAACGTTATCTTTCGTGATTTAAAGGCTTCTAATATCCTACTTGATTCAGATTTCAATGCAAAGCTTTCGGATTTTGGCTTGGCAAGAGATGGTCCTACTGGGGATAATACTCATGTTTCAACCAGAGTTATTGGAACTCAAGGTTATGCTGCACCAGAATATGTTGCTACCGGTCATTTGACACCAAGAAGTGATGTATACAGCTATGGTGTAGTCTTGTTAGAGCTACTAACAGGAAGGCGTGCAGTGGAAGATGATAGGCCAGGATTTTCTGAGGAAACTCTGGTGGATTGGGCAAAGCCATTCTTGAGTGATAGTAGAAGAGTTTTGAGAATAATGGATACAAGGTTGGGGGGCCAATACTCAAAGAAAGGAGCACAAGCTGCAGCTGCACTTGCATTGCAATGCCTTAACACTGACCCAAAATTTAGACCCCCAATGGTAGAGGTTCTAGCAGCATTAGAAGGACTTCAATCCTCAACCACAATGCCAAGGACACCAAAATCTGAGGGTCATGCAATTAAGCATTCTGGTGGCCATTCACAAAAGTAA 1134 0.4233 MGNTCGKPVAHVSSSNFAGNKKPVSKSKQYSNSSEKKAASESNFDKSISNKLKPFSLNDLKEATKNFRRENLIGEGGFGRVFKGWIDENTYAPTKAGSGIVVAIKNLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCLEGKNRLLVYEFMQKGSLENHLFRKGVQPMAWVTRVNIAIGVARGLTFLHSLDANVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTPRSDVYSYGVVLLELLTGRRAVEDDRPGFSEETLVDWAKPFLSDSRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNTDPKFRPPMVEVLAALEGLQSSTTMPRTPKSEGHAIKHSGGHSQK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0035 377 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 375 - -
Apr2g0035 377 Gene3D Phosphorylase Kinase; domain 1 41 152 - -
Apr2g0035 377 ProSiteProfiles Protein kinase domain profile. 67 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0035 377 MobiDBLite consensus disorder prediction 353 377 - -
Apr2g0035 377 Pfam Protein tyrosine and serine/threonine kinase 70 346 IPR001245 GO:0004672|GO:0006468
Apr2g0035 377 MobiDBLite consensus disorder prediction 1 43 - -
Apr2g0035 377 SMART serkin_6 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0035 377 Gene3D Transferase(Phosphotransferase) domain 1 153 370 - -
Apr2g0035 377 CDD STKc_IRAK 73 351 - -
Apr2g0035 377 PANTHER OS01G0588500 PROTEIN-RELATED 17 375 - -
Apr2g0035 377 SUPERFAMILY Protein kinase-like (PK-like) 42 358 IPR011009 -
Apr2g0035 377 ProSitePatterns Protein kinases ATP-binding region signature. 73 105 IPR017441 GO:0005524
Apr2g0035 377 MobiDBLite consensus disorder prediction 8 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0035 Apr-Chr2 590272 593730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0035 7 348 Glycoside Hydrolase AT3G07070 46.724 1.77e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr2g0035 PK_Tyr_Ser-Thr 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0035 - - gmx:100800654 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0035 2 590272 593730 Apr9g1591 9 25311541 25315418 PCT