Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0031 ATGGCCTTGGCTATGGTGGGAGAGGCACTAATATCTGCCTCTGTGGAGATCTTTTTAGATAGAATAACTTCTTCAGAGTTTCGAGATTTCTTTGCCAAGAGAAGGGTCGATGTTTCTTTGTTAGATGAACTGAGGATAAAGCTGCTGGCACTTAATGCTGTGTCCAATGATGCTGAGGAGAAGCAGATCACGGATCTCGCCGTGAAGGCATGGCTTGATGAGTTGAAAAATGCTGTCTTGGATGCAGAAGATTTGTTGGATGAAATCAACACTGAAACTTTGAGATGCAAGGTGGAGGGAGAATCTAAAAGCTTTACTACTCAGGTGAGATCATTACTTTCTTCCCCCTTTAATCAATTCTACAGGAGCCTGAATTCCAAGCTTGAAGCAATATCTCGAAAGCTAGAACATTTTGTGAAACAGAGAGATATTCTTGGTTTGCAAAGTGCTTCTAGGAAAGTCTCTTGTAGCAAGAGTACAGATTCGTTGATTGAACCTGTTGTGGTTGCTAGAGAGGATGACAAAGACAAGTTACTGAAGATGCTTTTATCTGATGTTGATGCCAGGTCTAATAATATAGAAGTGATCACAATCCTAGGCATGGGAGGTCTGGGCAAAACAACCCTTGCTCAATACCTTTATAATGATAGTGAAGTGGAGAAACATTTTGATTTGAAAGCTTGGGTATGGGTATCGGACGTTTATGACCTTTTCAAGGTAACAAAACACATTTTTGAGTCTGTCTCGTCCAAAGATTGTAATAGTACCAATCCAGATGTTATTCGTGTTGAATTAAAAAATAGCTTGAAAGATAAAAAAATTTTGCTTGTGCTCGATGACCTCTGGAATGAAGAGCGTAATGACTGGAATCAATTGATAACTCCTTTTGCTGGTGCGATAAAGGGAAGTAGGATCATTGTGACAACCCGACAACCAGAAGTTGCAAAGTTTACACATACATTTCCCACTTATGAGCTGAAATCTGTGACAGAGGAAGATTGTTGGAGGATACTCGCAAATCATGCATTTGGAAATGAAGGTTATGTCAAATATCCAAGTCTAGAAAAAATTGGTCGGCAAATTGCAAGAAAATGTAATGGCCTACCATTAGCTGCTAAAACATTGGGAGGTAGTTTGCAAACAGTTGATGAAAAGGAATGGAAAAGAGTTCTAGACAGCAAGTTGTGGGTACACAAGGATGTTTTACCAGCTTTGCGCATAAGTTATCTTCATCTTCCAGCACATTTGAAAAGATGTTTTGCCTATTGCTCAATCTTTCCAAAACAACATCTGTTGGACAGAGAAGACTTGATTTTGTTATGGATGGCCGAAGGCCTTCTACAACAATCCTCAGAGAAAGAACTGGAAGCAGTTGGTTCTGACTGCTTTGATGAGTTATTATCCAGATCCTTAATTCAGAAAGACAAAGCTGTTTCAGAGGACAAGTTCCGAATGCATGACCTCATCTATGATTTAGCTAGACTTGTATCAGGAAAAAGATCTCACTATCTTGATTTCAGTGAAATTCCAAAAAATGTGCGCCATCTATCTTTTTCTACGGACTATTATGACGTCTCTAAAAAATTTGAGAGCTTCTATGAGCTGAAATGTTTGCGGACATTTCTACCATTGAATAAATGGGCCTGTAACATAACCAGAAAAGTGCCACAAGATTTGTTGCCAAAACTAAAATGCCTACGAGTTCTATCATTATCAAACTATGGAAACATCACTGAGCTGCCTGATTCTATCGACCTCTTGGTGCTTCTGCGGTATCTTGACCTTTCCTCTACTTCCATCAAAAGGTTGCCCGATGCAACCTTCAAGCTTTACAATTTGCAGACTTTGAAATTGTCAAACTGTAGATCTCTTGTTGAGCTATCTGATTCCTTAAGCATGTTGGTGCTTCTGCGGTATCTTGACCTTTCTTCTACTTCCATCAAAAGGTTGCCCGATGCAACCTTCAAGCTTTACAATTTGCAGACTTTGAAATTGTCAAACTGTGAATCTCTTGTTGAGCTACCAGCACAGACAGGAAATTTGGTCAATTTACGACACCTTGATATCAGTGACACAAATTTGACGGAGATGCCAACACAGATATGCAGACTGCAAGATCTCCGTACATTGACTTCCTTCATTGTAGGCAAAGAAGATGGATTAAGGATCAGTGAATTAAGAAAATTTCCCTATCTGCGGGGTGAGCTTTCCATTCTGAAGCTGCAGAATGTTTTTGATCCCAGAGACGCATTTCAAGCCAACTTAAAGAACAAAGAGCAGATTGAGGAGCTTATGCTGGAGTGGGGCCGCGACCCACAAGATTCACAAGCTGAGAAGGATGTACTTGACAACCTGCAACCATCAACGATGTTAAAGAAACTGAGCATCAGATACTACAATGGCACAAGTTTCCCAAATTGGCTGGGTGACTCTTCATACCGTAATATTCAAGTACTGTGTATCAGTGACTGCAACTATTGCCTGTCACTTCCACCGTTTGGACAATTACCTTCTCTGAAAGAGCTTGTCATTGAAAGGATGAAAATGGTGAAGACAGTTGGTCAGGAGTTCTACTGCAGCAGTGCAAGCTCCCAATCTTTCCAGCCATTTCCATTGTTGGAAAGTCTTGAGTTTGAAGAGATGTCAGAGTGGGAGGAGTGGCTACCATTTGAAGGTGAAGGTAGCAAGTTTCCTTTTCCGTGCCTGAAGATTTTGCGTTTATCCGAATGTCCCTTGTTGAGAGGAAACTTGCCCAGTCATCTACCTTCTTTGGAAAAGGTTGATATCGCAGGGTGCAACCAGCTGGAGGCAAAATCATGCGATGTGCAGTGGAATACATCAATTGAAGTGACGAGTGTTAGAGAAGGGGGAGAGGGGTTGTTGTCTTTGCTTGACAACTTGTCTTGTCGTCACCTATCAATTGAAAAGTGTGACAGCTTGCAGTGTTTGCCAAGAATGATTCTCAATGCCAATTGTCTTCAAGAGTTGAATCTTACAAATATCAAGTCTTCGATTTCCCTCGCAACTGATGGTTGGCCCACGTCATTGCAATCACTTAACATCTCTAATTGTGAGAAGTTAGAATTTGTGTGTGATGAAAGATGGCACAAATGCACATCACTTGAACGCCTGGTAATCTTCGATAGTTGTGATTCGCTCATGTCCTTTCCGTTAGATTGCTTCCCAGCTCTTCGACGCCTTCAGTTCTCTGACTGTCCCTTGGAAGCAATTACTGATAAAGGTGGAAGGGCCTCTCCTAATTTATTATATTTTTTTATGGTCCATAATTGTAAGAAACTTAGGTCACTTCCAGAAGAGATGGATCTCCCTGCCCTTCAACGCTTGTGGCTTCGTGATCTTCCAGAGTTAACGTCATGGTCCCCAAGGTGGTTGCCTTCCAGTTTACGATATCTTGTTATTGATGTTGGAATAGTATCATCATCATTTATGTCTAAACAAGAGTTAGTTTGCCAATTCCAACGCCTCACTTCTCTGTCAGATCTTGATCTCCAGGGGAGTGGTTTGCGGGATGAAGATGTGATAAACACTTTGCTAAGGGAGCCATCACTGCCCACTTCTCTGACGTCTCTGACGCTATCCAAATTTGATGGTTTAAAGCGGTTGGAAGGGAAAGGGCTTCAACATCTCACTTCTCTTAGGGAGCTTGGCATCTTCAGCTGTGGAAGCCTCGAGTCATTGCCAGAGGAACAACTGCCATCGTCTCTCGAAGTACTGAGCATAGTGTGTTGTCCCTTACTAGAAGAAAGGTATGGAAAAGAGAAAGGGAAACACTTGACAAAGATTCCTGCCATACAAATAAACGGTGAAGTCATAATATGA 3840 0.4141 MALAMVGEALISASVEIFLDRITSSEFRDFFAKRRVDVSLLDELRIKLLALNAVSNDAEEKQITDLAVKAWLDELKNAVLDAEDLLDEINTETLRCKVEGESKSFTTQVRSLLSSPFNQFYRSLNSKLEAISRKLEHFVKQRDILGLQSASRKVSCSKSTDSLIEPVVVAREDDKDKLLKMLLSDVDARSNNIEVITILGMGGLGKTTLAQYLYNDSEVEKHFDLKAWVWVSDVYDLFKVTKHIFESVSSKDCNSTNPDVIRVELKNSLKDKKILLVLDDLWNEERNDWNQLITPFAGAIKGSRIIVTTRQPEVAKFTHTFPTYELKSVTEEDCWRILANHAFGNEGYVKYPSLEKIGRQIARKCNGLPLAAKTLGGSLQTVDEKEWKRVLDSKLWVHKDVLPALRISYLHLPAHLKRCFAYCSIFPKQHLLDREDLILLWMAEGLLQQSSEKELEAVGSDCFDELLSRSLIQKDKAVSEDKFRMHDLIYDLARLVSGKRSHYLDFSEIPKNVRHLSFSTDYYDVSKKFESFYELKCLRTFLPLNKWACNITRKVPQDLLPKLKCLRVLSLSNYGNITELPDSIDLLVLLRYLDLSSTSIKRLPDATFKLYNLQTLKLSNCRSLVELSDSLSMLVLLRYLDLSSTSIKRLPDATFKLYNLQTLKLSNCESLVELPAQTGNLVNLRHLDISDTNLTEMPTQICRLQDLRTLTSFIVGKEDGLRISELRKFPYLRGELSILKLQNVFDPRDAFQANLKNKEQIEELMLEWGRDPQDSQAEKDVLDNLQPSTMLKKLSIRYYNGTSFPNWLGDSSYRNIQVLCISDCNYCLSLPPFGQLPSLKELVIERMKMVKTVGQEFYCSSASSQSFQPFPLLESLEFEEMSEWEEWLPFEGEGSKFPFPCLKILRLSECPLLRGNLPSHLPSLEKVDIAGCNQLEAKSCDVQWNTSIEVTSVREGGEGLLSLLDNLSCRHLSIEKCDSLQCLPRMILNANCLQELNLTNIKSSISLATDGWPTSLQSLNISNCEKLEFVCDERWHKCTSLERLVIFDSCDSLMSFPLDCFPALRRLQFSDCPLEAITDKGGRASPNLLYFFMVHNCKKLRSLPEEMDLPALQRLWLRDLPELTSWSPRWLPSSLRYLVIDVGIVSSSFMSKQELVCQFQRLTSLSDLDLQGSGLRDEDVINTLLREPSLPTSLTSLTLSKFDGLKRLEGKGLQHLTSLRELGIFSCGSLESLPEEQLPSSLEVLSIVCCPLLEERYGKEKGKHLTKIPAIQINGEVII* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0031 1279 PRINTS Disease resistance protein signature 195 210 - -
Apr2g0031 1279 PRINTS Disease resistance protein signature 268 282 - -
Apr2g0031 1279 PRINTS Disease resistance protein signature 365 379 - -
Apr2g0031 1279 PRINTS Disease resistance protein signature 608 624 - -
Apr2g0031 1279 PANTHER DISEASE RESISTANCE PROTEIN RP 615 962 IPR044974 GO:0006952
Apr2g0031 1279 PANTHER DISEASE RESISTANCE PROTEIN RP 51 622 IPR044974 GO:0006952
Apr2g0031 1279 Coils Coil 41 61 - -
Apr2g0031 1279 Pfam NB-ARC domain 172 392 IPR002182 GO:0043531
Apr2g0031 1279 Pfam Rx N-terminal domain 39 104 IPR041118 -
Apr2g0031 1279 SMART LRR_typ_2 634 657 IPR003591 -
Apr2g0031 1279 SMART LRR_typ_2 1061 1084 IPR003591 -
Apr2g0031 1279 SMART LRR_typ_2 681 704 IPR003591 -
Apr2g0031 1279 SMART LRR_typ_2 587 610 IPR003591 -
Apr2g0031 1279 Gene3D Ribonuclease Inhibitor 643 949 IPR032675 -
Apr2g0031 1279 Gene3D Ribonuclease Inhibitor 950 1275 IPR032675 -
Apr2g0031 1279 SUPERFAMILY RNI-like 512 935 - -
Apr2g0031 1279 Gene3D Ribonuclease Inhibitor 524 642 IPR032675 -
Apr2g0031 1279 Gene3D - 152 321 IPR027417 -
Apr2g0031 1279 Gene3D - 408 496 IPR036388 -
Apr2g0031 1279 Pfam Leucine rich repeat 590 647 IPR001611 GO:0005515
Apr2g0031 1279 SUPERFAMILY L domain-like 967 1255 - -
Apr2g0031 1279 Gene3D - 35 131 - -
Apr2g0031 1279 PANTHER - 51 622 - -
Apr2g0031 1279 PANTHER - 615 962 - -
Apr2g0031 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 423 IPR027417 -
Apr2g0031 1279 Coils Coil 68 92 - -
Apr2g0031 1279 Gene3D - 328 407 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0031 Apr-Chr2 506791 511523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0031 192 703 WRKY Transcription Factor Family AT5G45050 23.132 6.17e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0031 - - aprc:113867106 1956.03