Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0027 ATGGCCTTGGCTATGGTGGGAGAGGTACTTATCTCTGCTTCTGTGCAGATCTTGTTAGATAGAGTAACTTCTACAGAGTTTCGAGATTTCTTTGCCAGTAGGAAGCTCAGTGTTTCTCTGTTAGATGAGCTGAGGATTAACCTGCTGGCACTTAATGCTGTGCTCAATGATGCTGAGGAGAAGCAGATCACTGATCCTAATGTGAAGGAATGGCTTGATGAGTTGAAAGATGCTGTCTTGGATGCAGAAGATTTGTTGGATGAAATCAACACTGAATCTTTGAGATGCAAGGTGGAGGGAGAATCTAAAAGCTTTACTACCCAGGTGAGATCATTATTTTCTTCCTCCTTTAATCAATTCTACAAGAGTATGAATTCCAAACTTGAAGCAATATCTGTAAGGCTAGAACATTTTGTGAAACAGAAGGATATTCTTTGTTTGCAAAGTGTTTCTAAGAGAGTCTCTTATACCAAAATTACAGATTCGTTGGTTGACCCTGTTGTGGTCGCTAGAGAGGATGACAAAGACAAGTTACTGAAAATGCTTCTATCTGATGATGATGAGAGTAATAGTAATATAGAAGTAATGACAATATGGGGCATGGGGGGTTTGGGCAAAACAACCCTTGCTCAATACCTCTATAATGACAACAAAGTGCATGAATATTTTGATTTGAAGGCTTGGGCATGGGTGTCTGATGATTTTGATGTTTCAAGGGTAACGAAGAAAATTATTGAGTCTATCACATCTAAAGATTGTAATATTACAAATCTAGATGTTCTTCGCGTTGAACTAAAGAACAACTTAAAAGATAAGAAGTTTTTGCTTGTGCTTGATGACCTTTGGAATGATAAGTATAACGACTGGCATCACCTAACAGCTCCTTTCAGTAGTGGGAAAAAGGGAAGTAAGATCATTGTGACAACCCGACAACAGAGAGTTGCACATATCACACATACACTTCACATTCATGAGCTGAAGAATCTAACCGATGAAAATTGTTGGCAAATACTGGCAACTCATGCATTCGGAAACGAAGGTTATGACAAATATCCGCACCTTGAAGAAATTGGTAGAAAAATTTCAAGAAAATGCAATGGCCTACCATTAGCTGCTAAAACTTTGGGAGGTCTTCTGCGATCTAAAGTTGATGCAGAGGAATGGAACAGAATTGAGAACAGTAACTTATGGGCACATGACGATGTTTTACCAGCTTTACGCATAAGTTATCTTCATCTTCCAGCCCAATTGAAAAGATGTTTTGCCTATTGTTCAATTTTTCCAAAACAGTATTTGTTGGATAGGAAGGAGTTAATTTTGTTATGGATGGGTGAAGGCTTTCTGCAACAATCCAAAGGAGGTCAAGCAATGGAATCCATATTCAATGAATTATTATCGAGATCCTTGATTGAAAAAGACAAAGCTGAAACAGAGGAAAAATTTCGAATGCATGACCTCATTTATGATTTGGCTAGACTTGTATCTGGAAGAAGTTCTTGCTACTTTGAAGACGGTGAAATCCCAGGAACTGCTCGCCATCTATCATTTCTTAGACAGTATTATGACATTTCTAAAAGATTTCAGGGCTTGTATGACCTAAAGTTTTTGCGCACCTTTATACCGCGATCTCTATATCGTCGTGAATGTTACTTGACCAAATCAGTGTTGCATGGTTGGTTGCCAAAACTAAGTTGTCTGAGAATACTGTCACTTTGTGGATACAAAAATATCGTTGAGCTGCCTGATTCAATGGGCATCTTGGTGCTTCTGCGGTATCTTGACCTTTCCTCTACTTCTATCAAAAGGTTGCCCCATGCAACCTTCAAGCTTTACAATTTACAGACTTTGAAATTGTCAAATTGTAAATATCTTGTTGAGCTACCAGCACAGATAGGAAATTTGGTCAATTTACGACACCTTGATATCAGTGACACAAATTTAACGGAGATGCCAACACAGATATGCAGACTGCAAGATCTCTGTACATTGACTTCCTTCGTTTTAGGCAAAGAAGATGGGTTAAGGATCAGTGAATTAAGAAAATTTCCCTATCTGCAGGGTAAGCTTTCCATTCTGAAGCTGCACAATGTTTTTGATCCTAGGGATGCATTTCAAGCCAACTTAAAGAACAAAGAGCAGATTGAGGAGCTTATGCTGGAGGGGGACAGAGACCCACAAGATTCACAAGTTGAGAAGGATGTACTTGACAACCTGCAACCATCGACGATGTTAAAGAAACTGAGCATCAGATACTACAATGGCACAAGTTTCTCAAATTGGCTGGGTGACTCTTCATACCGTAATATTCAAGTCCTGTGTATCAGTGACTGCAACTATTGCCTGTCACTTCCACCGTTTGGACAATTACCTTCTCTTAAAGAGCTTGTCATTAAAAGGATGAAAATGGTGAGGACAGTTGGTCAAGAGTTCTACTGCAGCAGTGCAAGCTCCCAATCTTTCGAGCCATTTCCATTGTTGGAAAGTCTTGAGTTTAAAGAGATGTCAGAGTGGGAGGAGTGGCTACCATTTGAAGGTGAAGGTAGCAAGTTTCCTTTTCCGTGCCTGAAGCGTTTGCATTTATCCGAATGTCCCTTGTTGAGAGGAAACTTGCCCAGTCGTCTACCTTCGTTGGAAGTGGTTGATATAGCAGGGTGCAACCAGCTGGAGGCAAAATCATGCGATGTGCAGTGGAATACATCAATTGAAGTGATGAGTGTTAGAGAAGGGGGAGAGGGGTTGTTGTCTTTGCTTGACAACTTGTCTTGTCGTCAACTATCAATTGTAAAGTGTGACAGCTTGCAGTGTTTGCCAAGAATGATTCTCAATGCCAATTGTCTTCAACGCTTGAATCTTTCAGATATCAAGTCTTCGATTTCCCTCACAACTGATGGTTTGCCCACGTCATTGCAATCACTTGACATCTCTAACTGTGAGAAGTTAGAATTTGTGTGTGATGAAAGATGGCACAAATACACATCACTTGAATACCTGGTAATCACGGAGAGTTGTGATTCGCTCATGTCCTTTCCGTTAGATTGCTTCCCAGCTGTTCGAGGCCTTCAGTTCTATGACTGTCCCAACTTGGAAGCAATTACTGATAAAGGTGGAAGGGCCTCTCCTAATTTATTAAAGCATTTAAATGTCGTTCATTGTAAGAAACTTAGGTCACTTCCAGAAGAGATGGATCTTCCTGCCCTTCGATACTTGTGGCTTCATGATCTTCCGGAGTTAGCGTCATTGTCCCCAAGGTGGTTGCCTTCCAGTCTACAATATCTTGATGTCAATGCTGGAATATTATCATGTATGTCTAGACAAGAGTTAGTTTGCCGATTCCAACGCCTCACTTCTCTGTCACGTCTTGATCTCAATGGGAGTGGTTTGGGGATGAAGAAGTGGTAA 3399 0.4042 MALAMVGEVLISASVQILLDRVTSTEFRDFFASRKLSVSLLDELRINLLALNAVLNDAEEKQITDPNVKEWLDELKDAVLDAEDLLDEINTESLRCKVEGESKSFTTQVRSLFSSSFNQFYKSMNSKLEAISVRLEHFVKQKDILCLQSVSKRVSYTKITDSLVDPVVVAREDDKDKLLKMLLSDDDESNSNIEVMTIWGMGGLGKTTLAQYLYNDNKVHEYFDLKAWAWVSDDFDVSRVTKKIIESITSKDCNITNLDVLRVELKNNLKDKKFLLVLDDLWNDKYNDWHHLTAPFSSGKKGSKIIVTTRQQRVAHITHTLHIHELKNLTDENCWQILATHAFGNEGYDKYPHLEEIGRKISRKCNGLPLAAKTLGGLLRSKVDAEEWNRIENSNLWAHDDVLPALRISYLHLPAQLKRCFAYCSIFPKQYLLDRKELILLWMGEGFLQQSKGGQAMESIFNELLSRSLIEKDKAETEEKFRMHDLIYDLARLVSGRSSCYFEDGEIPGTARHLSFLRQYYDISKRFQGLYDLKFLRTFIPRSLYRRECYLTKSVLHGWLPKLSCLRILSLCGYKNIVELPDSMGILVLLRYLDLSSTSIKRLPHATFKLYNLQTLKLSNCKYLVELPAQIGNLVNLRHLDISDTNLTEMPTQICRLQDLCTLTSFVLGKEDGLRISELRKFPYLQGKLSILKLHNVFDPRDAFQANLKNKEQIEELMLEGDRDPQDSQVEKDVLDNLQPSTMLKKLSIRYYNGTSFSNWLGDSSYRNIQVLCISDCNYCLSLPPFGQLPSLKELVIKRMKMVRTVGQEFYCSSASSQSFEPFPLLESLEFKEMSEWEEWLPFEGEGSKFPFPCLKRLHLSECPLLRGNLPSRLPSLEVVDIAGCNQLEAKSCDVQWNTSIEVMSVREGGEGLLSLLDNLSCRQLSIVKCDSLQCLPRMILNANCLQRLNLSDIKSSISLTTDGLPTSLQSLDISNCEKLEFVCDERWHKYTSLEYLVITESCDSLMSFPLDCFPAVRGLQFYDCPNLEAITDKGGRASPNLLKHLNVVHCKKLRSLPEEMDLPALRYLWLHDLPELASLSPRWLPSSLQYLDVNAGILSCMSRQELVCRFQRLTSLSRLDLNGSGLGMKKW* 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0027 1132 Coils Coil 41 61 - -
Apr2g0027 1132 Gene3D - 328 408 IPR042197 -
Apr2g0027 1132 Gene3D Ribonuclease Inhibitor 905 1127 IPR032675 -
Apr2g0027 1132 Gene3D - 409 493 IPR036388 -
Apr2g0027 1132 PRINTS Disease resistance protein signature 195 210 - -
Apr2g0027 1132 PRINTS Disease resistance protein signature 268 282 - -
Apr2g0027 1132 PRINTS Disease resistance protein signature 365 379 - -
Apr2g0027 1132 PRINTS Disease resistance protein signature 872 888 - -
Apr2g0027 1132 Pfam NB-ARC domain 171 393 IPR002182 GO:0043531
Apr2g0027 1132 Pfam Rx N-terminal domain 11 104 IPR041118 -
Apr2g0027 1132 Gene3D - 35 131 - -
Apr2g0027 1132 Gene3D - 149 323 IPR027417 -
Apr2g0027 1132 Gene3D Ribonuclease Inhibitor 533 904 IPR032675 -
Apr2g0027 1132 SMART LRR_typ_2 587 610 IPR003591 -
Apr2g0027 1132 SMART LRR_typ_2 634 657 IPR003591 -
Apr2g0027 1132 Pfam Leucine rich repeat 590 647 IPR001611 GO:0005515
Apr2g0027 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 424 IPR027417 -
Apr2g0027 1132 PANTHER DISEASE RESISTANCE PROTEIN RP 55 915 IPR044974 GO:0006952
Apr2g0027 1132 SUPERFAMILY RNI-like 767 1126 - -
Apr2g0027 1132 SUPERFAMILY L domain-like 482 905 - -
Apr2g0027 1132 Coils Coil 68 92 - -
Apr2g0027 1132 PANTHER - 55 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0027 Apr-Chr2 425247 429077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0027 192 831 WRKY Transcription Factor Family AT5G45050 22.222 4.22e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0027 - - aprc:113854710 2224.51