Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0024 ATGGCTGTTGTTTTCTCAAATCTACACACAGAGTCAGGTCTCAAGTCCCTTAATGACTTCCTCTCTGGAAAGACCTACATTTCTGGGGATCAGTTCACAAAGGATGACATCAAAGTGTATGCTGCTGTTTTGGAGAAGCCAGATGGCACTTTTGCCAATGTTGGAAAGTGGTACGAGGTTGTCTCTTCCCATCTTGCTGCGAGCTTCGGTGGCAGTGCTCAAGGGGTAAGATTCAGTGGCAAGGCTCCTGCTCCAGCTGAGGATGCTTCTGCTGCTGACGATGATGATGACCTTGATCTCTTTGGTGATGAGACAGAGGAAGACAAAAAGGCAGCAGAGGAAAGGGAGGCTGCTAAAAAACCTGCCAAGAAGAAAGAGAGTGGCAAATCTTCGGTTCTGCTTGATGTTAAGCCGTGGGATGATGAGACAGACATGAAGAAGCTAGAAGAGGCTGTTCGTAGCGTTGAGATGCCTGGTCTATTGTGGGGAGCATCCAAACTGGTTCCTGTTGGTTATGGGATCAAGAAGTTGCAGATCATGTTAACCATTGTTGATGACCTTGTATCCGTGGACTCCCTTATTGAGGAGCATCTGACGGTTGAGCCCTGCAACGAGCATGTCCAAAGCTGTGACATTGTTGCATTCAACAAAATTTAA 657 0.4703 MAVVFSNLHTESGLKSLNDFLSGKTYISGDQFTKDDIKVYAAVLEKPDGTFANVGKWYEVVSSHLAASFGGSAQGVRFSGKAPAPAEDASAADDDDDLDLFGDETEEDKKAAEEREAAKKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEMPGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTVEPCNEHVQSCDIVAFNKI* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0024 218 MobiDBLite consensus disorder prediction 89 103 - -
Apr2g0024 218 PANTHER TRANSLATION ELONGATION FACTOR EF1B/RIBOSOMAL PROTEIN S6-RELATED 1 218 - -
Apr2g0024 218 Pfam EF-1 guanine nucleotide exchange domain 131 218 IPR014038 GO:0003746|GO:0006414
Apr2g0024 218 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 94 102 IPR001326 GO:0003746|GO:0005853|GO:0006414
Apr2g0024 218 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 218 - -
Apr2g0024 218 MobiDBLite consensus disorder prediction 77 126 - -
Apr2g0024 218 MobiDBLite consensus disorder prediction 104 126 - -
Apr2g0024 218 Gene3D - 4 73 - -
Apr2g0024 218 SUPERFAMILY GST C-terminal domain-like 9 66 IPR036282 -
Apr2g0024 218 CDD EF1B 127 218 IPR014038 GO:0003746|GO:0006414
Apr2g0024 218 SMART EF1_GNE_2 129 218 IPR014038 GO:0003746|GO:0006414
Apr2g0024 218 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 207 218 IPR001326 GO:0003746|GO:0005853|GO:0006414
Apr2g0024 218 Gene3D - 122 218 IPR014717 -
Apr2g0024 218 SUPERFAMILY eEF-1beta-like 126 218 IPR036219 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0024 Apr-Chr2 377510 380829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0024 1 218 Eukaryotic Initiation Factors Gene Family AT5G12110 69.737 2.80e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0024 K03232 - gmx:100306132 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0024 2 377510 380829 Apr9g1599 9 25359772 25362287 PCT