Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0018 ATGGACACTTTGTTCTTCCTCAAGGAAATTGCTATGTCCATTTTGATCTTCTTGATCACCCATCTCTCCATTCGTTCACTCCTCAAAAACCATCACAAGAAACTTCCACCAGGGCCAAGAGGTTGGCCAGTTGTGGGTGCTCTGCCTCTAATGGGAAGCATGCCTCATGTCACACTCTCAAAAATGGCCAAAAAATATGGACCCGTAATGTACCTCAAAATGGGCACTAACAATATGGTTGTAGCCTCTACTCCTGCTGCTGCTCGTGCATTCCTCAAAACCCTTGACCAAAACTTCTCCAATCGACCCCGAAATGCTGGTTCAACTCATTTAGCTTATGATTCACAGGACATGGTGTTTGCTCATTACGGATCAAGGTGGAAGTTGCTTAGGAAACTAAGCAACTTGCACATGCTTGGAGGAAAGGCTCTTGATGATTGGGCACAAGTTCGAGAGGAAGAGATGGGGTACATGCTTCGTGCAATGTATGATTGTAGCAAGAAGGGTGAGGCTGTGGTGGTGGCTGAAATGTTGACATATGCTATGGCTAATATGATTGGTCAAGTGATATTGAGTCGTCGTGTGTTTGAGACAAAGGGTTTGGAGTCAAATGAATTCAAGGACATGGTTGTTGAACTCATGACCGTTGCTGGGTACTTCAATATTGGTGATTTTATACCCTTTTTGGCATGGTTGGATTTGCAAGGCATAGAACGTGGCATGAAAACGTTGCACAAGAAGTTTGATGTGTTGATAACAAAGATGATTGAGGATCATGTGGCTTCGAGTCATAAAAGAAAGGCTAAACCTGATTTCTTAGATGCTGTCATGGCTCATCATAGCGAAATTTCTGATGGGGAGAAACTATCGCTCACCAACATCAAGGCACTACTATTGAATCTGTTCACCGCAGGCACGGATACATCTTCAAGTATCATAGAGTGGGCACTAGCTGAGATGTTGAAAAACCCCAACATCATGAAGAGGGTTCATGAGGAAATGGACCAAGTCATAGGCAAGGGTCGACGCCTCCAAGAATCTGACATACCAAACCTTCCTTACTTGCAAGCAGTTTGCAAAGAGACGTATAGAAAGCACCCATCAACCCCATTGAACTTGCCTAGAGTCTCAGCTGAACCATGCCAAGTGAATGGCTACTACATCCCCAAGAACACTAGGCTTAGTGTGAACATATGGGCCATAGGGAGAGACCCTAATGTGTGGGAGAACCCTTTGGAGTTTAATCCAGAGAGGTTTTTGAGTGGGAAAAATGCAAAAGTTGATCCACGTGGCAATGATTTTGAGTTGATTCCATTTGGTGCTGGGAGAAGGATTTGTGCTGGGACAAGGATGGGTATTGTGTTGGTTCAATACATTTTGGGCACTTTGGTACATTCATTTCATTGGAAGCTACCAAATGGTGTTGTGGATTTGAACATGGAAGAGTCCTTTGGGCTTGCCTTGCAGAAAAAGGTTGCACTTTCAGCAATGGTTACCCCTAGGTTGCCCCCGAGTGCTTACATTCCTTAG 1530 0.4438 MDTLFFLKEIAMSILIFLITHLSIRSLLKNHHKKLPPGPRGWPVVGALPLMGSMPHVTLSKMAKKYGPVMYLKMGTNNMVVASTPAAARAFLKTLDQNFSNRPRNAGSTHLAYDSQDMVFAHYGSRWKLLRKLSNLHMLGGKALDDWAQVREEEMGYMLRAMYDCSKKGEAVVVAEMLTYAMANMIGQVILSRRVFETKGLESNEFKDMVVELMTVAGYFNIGDFIPFLAWLDLQGIERGMKTLHKKFDVLITKMIEDHVASSHKRKAKPDFLDAVMAHHSEISDGEKLSLTNIKALLLNLFTAGTDTSSSIIEWALAEMLKNPNIMKRVHEEMDQVIGKGRRLQESDIPNLPYLQAVCKETYRKHPSTPLNLPRVSAEPCQVNGYYIPKNTRLSVNIWAIGRDPNVWENPLEFNPERFLSGKNAKVDPRGNDFELIPFGAGRRICAGTRMGIVLVQYILGTLVHSFHWKLPNGVVDLNMEESFGLALQKKVALSAMVTPRLPPSAYIP* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0018 509 Gene3D Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 SUPERFAMILY Cytochrome P450 36 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PANTHER CYTOCHROME P450 71B11-RELATED 7 500 - -
Apr2g0018 509 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Apr2g0018 509 Pfam Cytochrome P450 36 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g0018 509 PANTHER FLAVONOID 3'-MONOOXYGENASE 7 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0018 Apr-Chr2 290067 294146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0018 1 507 Cytochrome P450 AT5G07990 47.173 6.47e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0018 K13083 - gmx:547705 907.131