Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0007 ATGGCCTTGGCTATGGTGGGAGAGCCACTTATCTCTGCTTCTGTGGTGATCTTGTTAGAGAGAATAACTTCTACAGAGTTTCGAGATTTCTTTGCCAGCAGGAGCCTCAATGTTTCTCTGTTGGATGAGTTGAAGATAAAGCTTGGGGCACTTAATGCTGTGCTCAATGATGCTGAGGAGAAGCAGATCACTGATGATGCTGTGAAGACATGGCTTGATGACTTGAAAGATGCTGTCTTGGATGCAGAAGATGTGTTGGATGAAATCAACACTGAATATTTGAGATACAAGGTGGAGGGAGAATCTAAAAGCTTTACCCAGGTGAGATCGTTATTTTCTTCTCCCTTTAATACCCTGAATGCCAAGCTTGAAGCAATATCTGGAAGGCTAGAACATTTTGTGAAACAGAAAGATATTCTTGGTTTGCAAAGTGTTTATAGGAGAGTCTCTTACAGCATAAGTACAGATTCGTTGGTTGAACCTGTTGTGGTTGCTAGAGAGGATGACAAAGCCAAGTTACTGAACATGCTTCTTTCTGATGTTGATGCCAATTCTAATAATATAGAAGTGATCACAATCCTAGGCATGGGAGGTCGGGGCAAAACAACCCTTGCTCAATACCTTTATAATGATAGTGAAGTGCAGAAACATTTTGACTTGAAAGCTTGGGTGAGGGTATCGGACGTTCATGATGTTTTCAAGGTAACAAAACAAATTGCTGAGTCTGTCTTGTCCAAAGATTGTACTGGTACCAATCCAGATGTTCTTCGTGTTGAATTAAAAAATAGCTTGAAATATAAAAAAATTTTGCTTGTGCTTGATGACCTCTGTAATGACGAGTATAATGACTGGAATCAATTGATAGCTGCTTTTACTAGTGGAAAAAGGGGAAGTAGGATCATTGTGACAACCCGACAACAAGAAGTTGCAAAGTTTACCCACACATTTCCCACTTATGAGCTGAAATCCCTGACAGGAAAATTGTTGGAGGATACTGGCAATTTATGCATTTAG 1014 0.4004 MALAMVGEPLISASVVILLERITSTEFRDFFASRSLNVSLLDELKIKLGALNAVLNDAEEKQITDDAVKTWLDDLKDAVLDAEDVLDEINTEYLRYKVEGESKSFTQVRSLFSSPFNTLNAKLEAISGRLEHFVKQKDILGLQSVYRRVSYSISTDSLVEPVVVAREDDKAKLLNMLLSDVDANSNNIEVITILGMGGRGKTTLAQYLYNDSEVQKHFDLKAWVRVSDVHDVFKVTKQIAESVLSKDCTGTNPDVLRVELKNSLKYKKILLVLDDLCNDEYNDWNQLIAAFTSGKRGSRIIVTTRQQEVAKFTHTFPTYELKSLTGKLLEDTGNLCI* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0007 337 PRINTS Disease resistance protein signature 190 205 - -
Apr2g0007 337 PRINTS Disease resistance protein signature 263 277 - -
Apr2g0007 337 Pfam Rx N-terminal domain 40 104 IPR041118 -
Apr2g0007 337 Coils Coil 41 61 - -
Apr2g0007 337 Gene3D - 39 125 - -
Apr2g0007 337 CDD RX-CC_like 13 89 IPR038005 -
Apr2g0007 337 PANTHER DISEASE RESISTANCE PROTEIN RP 51 319 IPR044974 GO:0006952
Apr2g0007 337 Coils Coil 72 92 - -
Apr2g0007 337 Pfam NB-ARC domain 169 315 IPR002182 GO:0043531
Apr2g0007 337 Gene3D - 152 316 IPR027417 -
Apr2g0007 337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 325 IPR027417 -
Apr2g0007 337 PANTHER - 51 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0007 Apr-Chr2 83681 86493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0007 169 324 WRKY Transcription Factor Family AT4G12020 28.824 3.12e-08 53.5