Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0003 ATGGCGAACATAGTAGCTGATTTGGGAAAGTCAATTTTGGAAAAATTAATGAATAATGCAATAGCCGAATCACGTTACATATGCTGCTTCTCATGCATTGTTAAAGACTTTGAAGATGAAAAGGAAGTTCTGAAAGCAACGAGAATGACTGTGGATGAATACACCAAAGTGGAGAAAAGAAAAGGAAACAATATTCGAGCAGATGTGACTTTTTGGCAAGAGAGAGCTGAAGAACTCATTCATGAGGACACTCAAATGAAAAAGACGTGTTTTTTTGGATGGTGTCCAAATTGCAAATGGAGATATAGTAAGGGAAAGCAATTGGCAAACAAGAAGAAAGAGATTGAAAGACTCTTAGAAAGTAAATTTGATAATGGCAATGTTGGAATTTCCCTTAATCTTCCAGGTGTTGAGTATCATTCTTCTCAAGATTACGTTTCTTTTGAAAGTAGAAAGTTGACAATCAAAGAACTTTCGGATGCATTGATAGATGACAGCAACTTTATAATTGGATTCCAAGGGATGGGGGGCACAGGTAAAACTACTCTGGCAAAAGAAGTGGGTAAGGAACTTGTGCAACTCACACAATTTGATCATGTCATTGATACTACAGTGTCATATACTCTTGATATAAGAAAGATTCAAGATGATATTGCTGCACCCTTAGGAGTGGATTTCAAGGATAAAAATAATTCAGAGAGACTCAAGCTTCTTTGGAGTAGATTAACTGATGGAGAGAAAATTCTTCTGATATTAGATGATGTGTGGAATCCTATCAATTTTGAAGAAATTGGGATTCCAAAGAAAGACAATCACAAGGGTTGCAGAATCCTTCTAACCACACGTGAAATGCGGGTTTGCCAATCAATGGGATGCGAAAAGATAATTCAACTGGGGGTTTTATCTAAGGAAGATGCATGGACCTTGTTCAAGAAGCATGCTAATATAAGCGATAGTTCCTCTAAACGTTTGTTGGATAAAGGGCGTGATATTACCAAAGAATGCAAGGGGTTACCGGTTGCAATAGCAGCCATTGCTAGCAGTTTAAGAGGTAAAGAAAGTTGGGAAGTGTGGAAATCAACATTAAAATCCTTGCAGAAGTCTGTGTCTAAGCACGATGTTGATGAAAATTTGGTTGATAAATGTTTGAGGCGTAGCTATCATAATTTGAAGGATGAAGGAGCCAAGAAACTGTTCCCTTTATGTTCTCTGTTTCCAGAGGATGAAGAACTTTCTGATGAAATTTTAACAAGATTTTGCAGAGGAGTGCGCCTTTTTGGGGAAATGGATATCAAATACGATGAACCTCGAGATCAAGTAGTTACTGCCAAAAATAAACTTGTAAATTCTTGTTTATTGGTAAAAGCTGGGAAACAAAGTGTTAAGATGCATGACTTGGTTCGTGATGTGGCCTTACGGATAGCTAATGAGGAAATTCAAGCAGTGAATTTGTCTGACAAAAATCAGAAGTCATTGCTTGAAAGGGGGGAAAATATTAAATATTTAGAATTTAATTCAATTGAAGTGATTGAAAGGTGCACTTTACTTGAAGAATTGTACATTGTTGGTACGAAAGTCAGGTTTGATCTTTCGCGTTTGCATGGAAAAATAACCTTTCCTCCATTAGAAAGGTACGTTATCAGTGACTACCTTAGAACGGTGGATGAATCGTTGTCAAGATGTGTGGCCTTACCGAATATTGATGCTATTTTCTCAGAAGTGACATTCAAGCATTTGGTGCAAACATCCGAACTTCTTCATCTGGTACGAATTAAAGGGGCATGGAGAAATCTCATACCTGATATTGTTCCCATAGATAGAGGTATGAATGACCTATTTCAGCTTGTTTTAACGGGGAGTCCACAATTGCGGTGTCTCATTGACACTACACATATTGATTCTCATAGACAAAGTTTCTTCTCCAAGTTGATTGAGCTAAAACTTCATCGCATGGAAAATTTCGAAAAACTATGCAATGGTCCCTTTCCCTCTGACTTTCTAAACAATTTACAGAGCCTAAATTTCCGTGAGTGTATAAACTTGAGAAGCATATTGTTTAAGAGCAAGCTAAACCTCTGCTATCTTAAGACCACTAAATTGTCCTATTGCCGAAAATTGGTATCCCTATTTCAATTGTCAACTTGTCAAAGCCTCTTGCTTTTGGAGGAACTGTCCATAGAAGATAGTGAGCAACTAACAAACATAATAGCAGCATATGAAAGAATAAGGGAGGAATTGAAGGAAGAAATTGTTAGTGGTGAGAATGATAACAAGAGTTGTGTCTCCATGTTTCCAAAACTGAAAACTCTATATATTAGCAAGTGCCCCCATTTGGAATATATACTTCCAAGTCCAACTCTTTCTCCTCAAGTTGTTCCATTGCTAGAAACTATCAGAACACATGATTGTGGTGAGCTGAAATACATATTTCATGAACACCAACATGAACATGCAAGTCAGGATCTGCATCAAGAGGCAAAGGATATCATACTTGGCTCACTGAAAGAGGTGTCAAACATTGACTATCTTCATCTTTGGCAACGTGCTCAGTGTCTTTCGAAACAACCACATATCCTGCGCAACATTAAAGAACTTGAGCTACAAAATTTTTCAAAGACAAAATCTGTATTTATCTTATCTATTGCCCCAATGATGTTGGAAAAATTGAGAATTCAGGACCGTGACGAATTACAGCACATAATAATAGACACCAGAGATGACCTTGTTGACAATAATTTGAGTTATGTCTTCCCAAAATTGAAAAAGATCTCTGTGAAAGATGCAAGCCAGCGGATTGAATTGAAGAATACAGATCTTTGGGTGCAGAGCTGTCCAAAACTCTCTTTGACTTCAACGATAGAGGCCAATCAGTTGAGGCTTAAAGTTGTATACTATGTTTATGGAGAAAATCTGAGTAAATATTCCATTGAAATATTGCAATACATTGCTCGACATTTTGAAGACTTAATAACCCAAGATACTAGCAATGAAAATCAAACTATAGAAATCACTGAAGACATTGAAGTTGAGCCGGATGTCCAAGCACAAAGTGAGTTGGCTTCTTCAGAAGTCAATACGAATCAATCCATTGCAGAGATAGAGCATGAAATTGTTGAACAAGTTTCGAGTTTAAAGATATCATTGGCAACAACATCACCAAGTAAAAGGCATGAAGCACATTCAGATGAAGATGATGGTGGCCAAATAACTACACCTTTTTCAGTTATCACTAGAGAGAATCCTACCACAAAAAATGTTCAAGAAATTACTGAGACTCATGCTCCAGAAAACTATAACATTGGGCATGAAGTTCAAGCAACATCAGAGCATGAGTTAACTCCACCACAAGTTAATGGAAATCAATCTATTCAAGCAACTCAAACTGAATATATTCAAGAAGGAAGTGACTTTAAATCTAACATGTTCATCTCTGTGGAGACAAAAGCCAAACCTTCACAAAAGGCAGAGAAGGGTTTTGTGGAAGAAGTTACTGGTTTAGAGATTCCCTTGCCAAACATTTCACCAACAGATGCAGCAAATGCCAAGATAAGTCCTTTGGATAGTCTTCTACATAAAACCCATTCAGATGTAAGTGTACCATATAGTGTCTGTTTGATTTAA 3621 0.3712 MANIVADLGKSILEKLMNNAIAESRYICCFSCIVKDFEDEKEVLKATRMTVDEYTKVEKRKGNNIRADVTFWQERAEELIHEDTQMKKTCFFGWCPNCKWRYSKGKQLANKKKEIERLLESKFDNGNVGISLNLPGVEYHSSQDYVSFESRKLTIKELSDALIDDSNFIIGFQGMGGTGKTTLAKEVGKELVQLTQFDHVIDTTVSYTLDIRKIQDDIAAPLGVDFKDKNNSERLKLLWSRLTDGEKILLILDDVWNPINFEEIGIPKKDNHKGCRILLTTREMRVCQSMGCEKIIQLGVLSKEDAWTLFKKHANISDSSSKRLLDKGRDITKECKGLPVAIAAIASSLRGKESWEVWKSTLKSLQKSVSKHDVDENLVDKCLRRSYHNLKDEGAKKLFPLCSLFPEDEELSDEILTRFCRGVRLFGEMDIKYDEPRDQVVTAKNKLVNSCLLVKAGKQSVKMHDLVRDVALRIANEEIQAVNLSDKNQKSLLERGENIKYLEFNSIEVIERCTLLEELYIVGTKVRFDLSRLHGKITFPPLERYVISDYLRTVDESLSRCVALPNIDAIFSEVTFKHLVQTSELLHLVRIKGAWRNLIPDIVPIDRGMNDLFQLVLTGSPQLRCLIDTTHIDSHRQSFFSKLIELKLHRMENFEKLCNGPFPSDFLNNLQSLNFRECINLRSILFKSKLNLCYLKTTKLSYCRKLVSLFQLSTCQSLLLLEELSIEDSEQLTNIIAAYERIREELKEEIVSGENDNKSCVSMFPKLKTLYISKCPHLEYILPSPTLSPQVVPLLETIRTHDCGELKYIFHEHQHEHASQDLHQEAKDIILGSLKEVSNIDYLHLWQRAQCLSKQPHILRNIKELELQNFSKTKSVFILSIAPMMLEKLRIQDRDELQHIIIDTRDDLVDNNLSYVFPKLKKISVKDASQRIELKNTDLWVQSCPKLSLTSTIEANQLRLKVVYYVYGENLSKYSIEILQYIARHFEDLITQDTSNENQTIEITEDIEVEPDVQAQSELASSEVNTNQSIAEIEHEIVEQVSSLKISLATTSPSKRHEAHSDEDDGGQITTPFSVITRENPTTKNVQEITETHAPENYNIGHEVQATSEHELTPPQVNGNQSIQATQTEYIQEGSDFKSNMFISVETKAKPSQKAEKGFVEEVTGLEIPLPNISPTDAANAKISPLDSLLHKTHSDVSVPYSVCLI* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0003 1206 Pfam NB-ARC domain 155 389 IPR002182 GO:0043531
Apr2g0003 1206 SUPERFAMILY L domain-like 459 804 - -
Apr2g0003 1206 Gene3D - 387 473 IPR036388 -
Apr2g0003 1206 PRINTS Disease resistance protein signature 169 184 - -
Apr2g0003 1206 PRINTS Disease resistance protein signature 242 256 - -
Apr2g0003 1206 PRINTS Disease resistance protein signature 335 349 - -
Apr2g0003 1206 PRINTS Disease resistance protein signature 762 778 - -
Apr2g0003 1206 PANTHER - 46 490 - -
Apr2g0003 1206 PANTHER - 543 839 - -
Apr2g0003 1206 Coils Coil 729 756 - -
Apr2g0003 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 402 IPR027417 -
Apr2g0003 1206 Gene3D - 300 386 IPR042197 -
Apr2g0003 1206 MobiDBLite consensus disorder prediction 1049 1072 - -
Apr2g0003 1206 Gene3D Ribonuclease Inhibitor 615 810 IPR032675 -
Apr2g0003 1206 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 46 490 - -
Apr2g0003 1206 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 543 839 - -
Apr2g0003 1206 Gene3D - 135 297 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0003 Apr-Chr2 13265 26763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0003 170 598 WRKY Transcription Factor Family AT5G45050 24.569 1.88e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0003 - - aprc:113854103 2365.5