Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2631 ATGGAGTTGAAAAGGGGCAAGCTTGTTAGGACAGCATATGTGGCACCGAGCTCGCGAGTGTTTGGTAGGGGTGAACTTGTCATGGACCCAAAAAAAATTGCAAGGAGATATTTCAGATCTGATTTCTTCATTGATTTTATCGCCACACTACCTTTACCTCAGATGGTCATCTGGTTTATTATACCAGCAACAAGAAGCCCTCAAACTGATCACAAGAATAATGCTCTTGCATTGATTGTTTTGCTACAATATATTCCAAGGTTATATTTGATTTTTCCATTAAGTTCTCAAATAATCAAAGCAACAGGAGTGGTTACGAAGACTGCGTGGGCAGGAGCTGCGTATAATTTGCTATTGTATATGCTAGCTAGCCATGTTTTAGGGGCAGCTTGGTATCTTCTATCTGTGGACAGATACACTACTTGTTGGAAATCCTATTGCAAAAAGGAACGTAGCCCTGATAATTGCTTTCTTTACCTAGACTGCAGTTCTTTGAATAATGAGCTACGCAAGATATGGGCAAATAGTACAAATGTGTTTAGCAGCTGTGATCCCAGTAATGATGATATCAACTTTAAGTATGGAATATTTGAAAATGCAGTAAAGAAACATGTTGTCTCGTCAAGCTTTATACCAAAATACTTTTATTGTTTATGGTGGGGTTTGCAGCAATTAAGTTCTTATGGGCAGAATCTAGAAACTAGCACTTTTATTGGAGAAACATCATTTGCTATTGTCATTGCCATCTTGGGTCTTGTATTATTTTCCCACTTAATTGGCAACATGCAGACATATTTGCAATCAATTACTATAAGGCTTGAGGAGTGGAGACTTAAGCGAAGAGACACAGAGGAGTGGATGAGGCATCGCCAACTACCTGAAGATTTGAAAAGTCGTGTTAGACGATTTGTTCAATATAAATGGCTTGCTACTCGTGGAGTTGATGAGGAAACCATTTTACGTGCATTACCAGCTGATCTTCGTCGTGATATCCAACGCCACCTGTGCTTAGACCTTGTTAGACGAGTTCCCTTCTTCTCTCAGATGGATGATCAGCTTCTGGATGCAATATGTGAGCGGCTGGTGTCATCTCTAAGCACTCTAGGCACCTACATTGTTCGCGAGGGTGACCCTGTGACTGAAATGCTTTTCATCATTAGAGGTAGGCTGGATAGTTCAACAACAAATGGTGGTCGGACTGGTTTCTTCAACTCAATCATTTTGAGACCTGGAGATTTTTGTGGTGAGGAACTGCTTTCGTGGGCTTTACTCCCGAAATCAACCATTAATTTGCCTTCTTCAACTAGGACAGTTAAAGCCCTAAGTGAGGTTGAAGCCTTTGCTCTTCGGGCTGAAGACCTCAAATTTGTTGCTAATCAATTTAGGCGCCTCCACAGCAAGAAGCTGCAGCACACTTTTCGATTTTATTCCCACCATTGGAGGACTTGGGCAGCATGCTTTATACAGGCTGCTTGGCGTCGATATAAGAAAAGGATGTCTGTGAAGGACCTCAGTTTGAGGGAATCCATTCCCTTAGACGAGACTATAGCCAGCGAGAGGGAACATGAGGAGGACTATCCTGCCGGTTCAAATTCATCTCAGGCTAAATTGAACCTTGGGGTTACAATTCTTGCCTCGAGGTTTGCAGTTAACACACGAAGAGGAGCTCTGAAGATTAAAGATGACATGCCTCAGTTACGGAAGCCTGAAGAACCTGACTTTTCTACAGAAGCCGATGATGATTAG 1746 0.4198 MELKRGKLVRTAYVAPSSRVFGRGELVMDPKKIARRYFRSDFFIDFIATLPLPQMVIWFIIPATRSPQTDHKNNALALIVLLQYIPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSVDRYTTCWKSYCKKERSPDNCFLYLDCSSLNNELRKIWANSTNVFSSCDPSNDDINFKYGIFENAVKKHVVSSSFIPKYFYCLWWGLQQLSSYGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMRHRQLPEDLKSRVRRFVQYKWLATRGVDEETILRALPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTLGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTINLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSVKDLSLRESIPLDETIASEREHEEDYPAGSNSSQAKLNLGVTILASRFAVNTRRGALKIKDDMPQLRKPEEPDFSTEADDD* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2631 581 MobiDBLite consensus disorder prediction 560 574 - -
Apr1g2631 581 SUPERFAMILY Voltage-gated potassium channels 32 267 - -
Apr1g2631 581 SUPERFAMILY cAMP-binding domain-like 275 467 IPR018490 -
Apr1g2631 581 MobiDBLite consensus disorder prediction 560 581 - -
Apr1g2631 581 ProSiteProfiles cAMP/cGMP binding motif profile. 345 475 IPR000595 -
Apr1g2631 581 CDD CAP_ED 345 476 IPR000595 -
Apr1g2631 581 Gene3D Jelly Rolls 343 463 IPR014710 -
Apr1g2631 581 Gene3D Helix hairpin bin 273 336 - -
Apr1g2631 581 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 10 578 - -
Apr1g2631 581 Pfam Ion transport protein 27 271 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr1g2631 581 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 10 578 - -
Apr1g2631 581 SMART cnmp_10 345 476 IPR000595 -
Apr1g2631 581 Pfam Cyclic nucleotide-binding domain 369 456 IPR000595 -
Apr1g2631 581 Gene3D - 19 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2631 Apr-Chr1 35675133 35680575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2631 10 580 Ion Channels AT4G30360 74.913 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2631 K05391 - gmx:100808425 1095.49