Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2630 ATGTTGATAACGGTTAGGGAAGCATGTTCTTCTTCTCCCCTCTGTTTCTGGCTTAATCGTCAGAACCCAAAACCCTATAAAACGCTAAAATCTTGCATTTGGAAAGCCTCTTTATCTGTCCAACGAAGACCCAACATTTCCATTCATTCTTCTAATTCCGCTGCTCACCTCTCTTGCAGCAGTGAGGTAGCAAATTTTGATCCCTTGGGTATTAACTCAGATTTATCTTCTGCTCTGAATTCTACCTGGAAAAATCTGGCGTGCTTTTTTACGCAAACATTTGAGAGTGCTTCAAGTACAGAAAAGGAAAAACCTAACTCTTCACGAGGATTAGCAGCTGCAATAGAGGACAGTTCAATAGATTTTGGTGACTTCTTCAAAGGTCCGCTGCCCGGGAAGTTTCTCAAGCTATTAGGGTTCCTCGCATTGTCTCGGCTTGGTGTATACATACCTCTAGGTGGAGTTAATAGGGAGGCTTTTGTTGGAAATTTGGATCAAAACAGTTTATTAAGCACTCTGGACTCATTTTCTGGTGGAGGTATTGGTAGACTTGGGGTATGCTCCCTTGGTATTGTTCCATTCATCAATGCACAAATTGTTTTCCAGCTTCTAGCCCAAATATACCCCAAATTGCAAGATCTTCAAAAAAGAGAAGGTGAGGCTGGGAGGAAGAAAGTTTTGCAGTACACTCGATATGCCTCAGTTGGATTTGCCATTGTACAGGCAATTGGCCAAGTTCTTTACCTACGTCCCTATGTCAACGACTTTTCTGTAGAGTGGGTTCTTTCTTCTGTTATCTTATTGACTCTTGGCTCTGTGTTTACAACATACATTGGAGAACGAATCACAGACCTAAAACTTGGGAATGGCACCTCTCTTTTGATATTCACAAACATTATTTCCTACTTGCCAGCTTCTTTTGGTAGGACAATTGCGCAAGCATTTAATGATGCTAACTATGTTGGACTTGCTACTATCATTGTGTCCTTCTTTTTGTTGGTAGTTGGTATAGTCTATGTTCAGGAAGCAGAGAGAAAAATCCCACTTAACTATGCTTCTAGATTTACCAGTAGAAGTGGTGGATTAGAAAAATCGGCTTACCTACCCTTTAAGGTAAATAGTTCTGGAGTAATGCCCATCATATTTTCTACATCATCATTAGCTCTTCCTGGTACCGTAGCACGCTTCACTGGTTTAACAGCACTAAAGAAAGCTGCGGTGGCTTTAAATCCAGGGGGTTCCTTTTACCTTCCATTTAACATACTTTTGATAGCATTCTTCAATTACTATTACACTTTCCTACAACTGGACCCTGATGATGTGAGTGAACAATTGAAACGTCAAGGTGCTTCAATTCCACTTGTCAGACCAGGCAGAAGTACAGCTACATTTATCAAAACAGTTCTTAGTCGAATATCAGTTCTGGGTTCAACATTTTTGGCTATCTTGGCTGCTGGTCCCGCAGTTGTTGAGCAGACCACACACCTGACTGCGTTCCGGGGATTTGCAGGAACATCTATTCTTATTCTTGTTGGTTGTGCAACAGACACAGCAAGAAAAGTTCAAGCTGAGATTATATCCCAGAAGTACAAGAACATTGAGTTCTATGATTTTGACAAATATTGA 1626 0.409 MLITVREACSSSPLCFWLNRQNPKPYKTLKSCIWKASLSVQRRPNISIHSSNSAAHLSCSSEVANFDPLGINSDLSSALNSTWKNLACFFTQTFESASSTEKEKPNSSRGLAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGVCSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSVEWVLSSVILLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTIAQAFNDANYVGLATIIVSFFLLVVGIVYVQEAERKIPLNYASRFTSRSGGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTVARFTGLTALKKAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 134 152 - -
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 184 204 - -
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 226 249 - -
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 258 283 - -
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 284 307 - -
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 375 394 - -
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 414 436 - -
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 469 487 - -
Apr1g2630 541 PRINTS Preprotein translocase SecY subunit signature 503 521 - -
Apr1g2630 541 Hamap Protein translocase subunit SecY [secY]. 122 534 IPR026593 -
Apr1g2630 541 ProSitePatterns Protein secY signature 2. 277 294 IPR030659 -
Apr1g2630 541 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 52 539 - -
Apr1g2630 541 Pfam SecY 186 517 IPR002208 GO:0015031|GO:0016020
Apr1g2630 541 Gene3D SecY subunit domain 125 530 IPR023201 -
Apr1g2630 541 ProSitePatterns Protein secY signature 1. 185 204 IPR030659 -
Apr1g2630 541 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 52 539 IPR002208 GO:0015031|GO:0016020
Apr1g2630 541 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 133 530 IPR002208 GO:0015031|GO:0016020
Apr1g2630 541 SUPERFAMILY Preprotein translocase SecY subunit 126 524 IPR023201 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2630 58 541 Chloroplast and Mitochondria Gene Families AT2G18710 84.091 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2630 K10956 - gmx:100810430 920.613