Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2615 ATGGGCCAATCAGAGTTGTGGTCTAAAATTATAGGCACAGCCACAGTGTTCTTATTTTGCAGTTTTACAGTTGCAACATCTTCTCCGACTTGCAGTTCCAAGGAATTGCCCCAACAATGCAAGGACAGGGTTGGTAGACTCCCAGGGCAAACCTTCAACATCAGCTTTGCACACTATGCTGGCTACATCACGGTCAATGAAAAGGATGAAAGGAATCTCTTCTACTGGTTCATTGAAGCACTCGAAGACCCTCAATCCAAACCCCTTGTTTTATGGCTCAATGGAGGGCCTGGATGTTCTTCCATTGCTTACGGAGAGGCAGAGGAAATTGGCCCATTTCATATAAATTTAGATGGCAAGACCCTTTATCTCAATCCTTATTCTTGGAACCGAGTTGCCAACATTCTTTTTCTTGACACTCCTGTTGGGGTTGGATTTTCTTATTCAAATAAGACATCTGATCTGCTCAACAATGGCGATAAGAGGACAGCTGAAGACAATTTGGTATTTTTAGTGAAGTGGTTGGAGCGTTTCCCCCTGTATAAAAGAAGTGACTTTTTTATCAGTGGTGAGAGCTATGCAGGACATTATGTTCCTCAACTTAGCCAAGCTATTGTAAAGTACAACTTGGCTACCAAAGAAAATGCTATAAATCTGAAAGGTTTTCTGGTTGGAAATGCTCTAACAGACGATTTCCATGATCAGTTGGGGATTTTTGAGTTTATGTGGTCAAGTGGTTTGATTTCGGATCAAACCTACAGGTTTTTGAACCTGCTATGTGATTTTCAGTCAGTTGTACATCCGTCAGATTCATGTGAAAAAGTTATGGAAATTGCTGATAAAGAAATGGGAGATATAGACCCGTACAGTCTCTTTACTCCCCCGTGCCATGCTAATGTTAGCCAGTTAAATCAGCTGAGAATTGGCAGACTCAGTGCAGGGTATGATCCTTGCACTGAAAAGCACACCACAGTATACTTCAATCGACCTGAGGTCCAAAAGATTCTTCATGTTGATCCTGATCATAAGCCTGCTAAATGGGAGACCTGCAGTGAAGTGGTAAATACACATTGGATGGATTCTCCAAGATCAGTACTCAATATTTATCGGGAACTTATTCGAACGGGATTGAGAATATGGATGTTCAGTGGTAATACAGATGTTGTAATCCCTGTGACATCTACGCGCTATAGCATAAAAGCTCTTAAGCTTCCTACAGTGAGTCCTTGGCATGCATGGTATGATGATGGGGAGGTAGGAGGATGGACCCAGGAATATGCTGGACTTACGTTTGTGGCTGTGAGGGGTGCAGGCCACGAAGTTCCTCTGCACAAACCAAAACTTGCTCTCACACTGTTCAAAGCCTTCTTAGCTGGAACCTCAATGCCCACCCTCGAGCTTCTTCGTTCCTCTTGA 1416 0.4301 MGQSELWSKIIGTATVFLFCSFTVATSSPTCSSKELPQQCKDRVGRLPGQTFNISFAHYAGYITVNEKDERNLFYWFIEALEDPQSKPLVLWLNGGPGCSSIAYGEAEEIGPFHINLDGKTLYLNPYSWNRVANILFLDTPVGVGFSYSNKTSDLLNNGDKRTAEDNLVFLVKWLERFPLYKRSDFFISGESYAGHYVPQLSQAIVKYNLATKENAINLKGFLVGNALTDDFHDQLGIFEFMWSSGLISDQTYRFLNLLCDFQSVVHPSDSCEKVMEIADKEMGDIDPYSLFTPPCHANVSQLNQLRIGRLSAGYDPCTEKHTTVYFNRPEVQKILHVDPDHKPAKWETCSEVVNTHWMDSPRSVLNIYRELIRTGLRIWMFSGNTDVVIPVTSTRYSIKALKLPTVSPWHAWYDDGEVGGWTQEYAGLTFVAVRGAGHEVPLHKPKLALTLFKAFLAGTSMPTLELLRSS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2615 471 SUPERFAMILY alpha/beta-Hydrolases 41 462 IPR029058 -
Apr1g2615 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Apr1g2615 471 Gene3D - 365 459 - -
Apr1g2615 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Apr1g2615 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Apr1g2615 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Apr1g2615 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Apr1g2615 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 465 IPR001563 GO:0004185|GO:0006508
Apr1g2615 471 Pfam Serine carboxypeptidase 48 458 IPR001563 GO:0004185|GO:0006508
Apr1g2615 471 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 16 465 - -
Apr1g2615 471 Gene3D - 318 356 - -
Apr1g2615 471 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Apr1g2615 471 Gene3D alpha/beta hydrolase 39 298 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2615 Apr-Chr1 35558794 35562520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2615 345 462 Calmodulin-binding Proteins AT2G22960 26.050 8.22e-11 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2615 1 35558794 35562520 Apr1g2615 1 35558794 35562520 ECH