Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2595 ATGTTTGACTGTGGTTACAAGTCACAATATGTGGGCGGGCAGCGGGAAAAATTTGTGAGGTTGGATGACTTGGATTCCAGACTATCATCATCTTCTGATGCTGGAATTAAAACATGTGGCTTTAGTATTGATAAATTAAGCCATGGTGGCCATGGAAGCACCACAACCTCTAGGTCTTTTAAAAGAGGAATTAGAAAGGGATCTGAAGGACTGAAGTCAATTGGCCGATCACTTGGATTTGGGGTATCTAGAGCAGTGTTCCCTGAAGATCTTAAAGTTTCAGAAAAGAAGATATTTGATCCTCAAGACAAATTTTTGCTCTTATGGAATAAGCTTTTTGTTATCTCATGCATCTTGGCTGTGTCTGTGGATCCACTTTTTTTCTATCTTCCTGTCATTAATGATTCATTCCGCTGTCTTGGTATAGACCAAAAATTGGCAATTACAGTCACCACCTTGAGGACATCTGTTGATGCTTTCTACCTCATACACATGGCTCTCCAATTTCGTACTGCTTATATCGCCCCATCATCTCGTGTTTTTGGACGGGGTGAACTTGTGATAGATCCAGCACAGATAGCCAAACGATACCTACGGCGGTATTTCATCATTGATTTTCTATCAGTGTTACCCTTACCACAGATTGTGGTTTGGAGATTTCTGCAGAGGTCAAAAGGTTCGGATGTACTTGCGACAAAGCGGGCCTTGCTGTTCATTATTTTGCTTCAATACTTTCCTAGATTATTCCGGATGGTACCGTTGACTTCTGAACTTAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGTGCTGCGTATTATTTGCTATTATTCATGCTTGCTAGTCATATAGTTGGGTCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGACTTTTGCTGGCAAAAGGCTTGCAGTGACAGTGGGTACAACAAAAATTTCTTGTATTGTGGCAACCAACACATGAAAGGTTATAGTGCCTGGCAGAATCATAGTGAAAATATTCTTACGTCACAGTGCTCTGCAGATAATGATAATTCACCTTTTGACTATGGAATTTTCAAACAAGCCTTGTCATCTGGTATCGTTTCATCTAAGAAGTTCTTCTCCAAGTACTGTTACTGTTTATGGTGGGGGCTACAGAATTTGAGTACGCTCGGCCAGGGGCTTCAAACTAGCACCTACACTGGGGAAGTTATCTTTTCAATAGCACTAGCCATATCTGGCCTTATCCTGTTTGCGCTTCTGATTGGTAACATGCAGACATATCTTCAGTCTCTTACAATTAGACTTGAAGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGTTTGCTCCCACCAGAGCTTAGAGAGCGTGTGAGACGATATGATCAATATAAGTGGTTAGCAACACGTGGTGTAGATGAAGAAAATTTGGTTCAGAGTTTGCCTAAGGATCTCCGAAGAGACATTAAGCGACACCTTTGTCTTGCTCTAGTGAGAAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGATTGAAGCCATGTTTATTTACAGAGAGTACTTACATTGTCCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATACGGGGTCGCCTTGAGAGTGTTACTACAGATGGTGGGAGGAGTGGATTTTTCAATCGTGGTTTTTTAAAAGAGGCTGATTTCTGTGGTGAGGAGCTTTTGACATGGGCACTGGATCCCAAATCTGGCTCTAACCTCCCATCTTCTACTCGAACAGTTAAAGCTTTAACAGAAGTTGAGGCTTTTGCATTAACTGCTGAAGAGTTAAAATTTGTTGCCAGTCAGTTTAGGCGTCTGCACAGTAGACAGGTTCAGCACACCTTTCGCTTTTATTCCCAACAATGGAGGACTTGGGCTGCGTGCTTCATTCAAGCAGCATGGCGTCGTTATTCCAAAAGGAAAATTATGGAGCTTCGTCGAAAGGAAGAACCTGAGGAGTCAGAAGGAACTCGAAGCAATGCTAGTGGCAGTTCTTACAGTCTTGGTGCCACGTTCTTGGCCTCAAGATTTGCTGCAAATGCTCTTCGTGGTGTACATCGCAACCGGGAAGCTAAGAGTGCCAGAGAGTTGGTGAAACTACAGAAACCTCCAGAGCCCGACTTTACTGCTGATGATGCAGACTAA 2199 0.4275 MFDCGYKSQYVGGQREKFVRLDDLDSRLSSSSDAGIKTCGFSIDKLSHGGHGSTTTSRSFKRGIRKGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSFRCLGIDQKLAITVTTLRTSVDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKRALLFIILLQYFPRLFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERNDFCWQKACSDSGYNKNFLYCGNQHMKGYSAWQNHSENILTSQCSADNDNSPFDYGIFKQALSSGIVSSKKFFSKYCYCLWWGLQNLSTLGQGLQTSTYTGEVIFSIALAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPPELRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKIMELRRKEEPEESEGTRSNASGSSYSLGATFLASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTADDAD* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2595 732 MobiDBLite consensus disorder prediction 664 683 - -
Apr1g2595 732 SUPERFAMILY Voltage-gated potassium channels 100 427 - -
Apr1g2595 732 ProSiteProfiles IQ motif profile. 641 670 IPR000048 GO:0005515
Apr1g2595 732 SMART cnmp_10 505 636 IPR000595 -
Apr1g2595 732 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 12 729 - -
Apr1g2595 732 SUPERFAMILY cAMP-binding domain-like 434 625 IPR018490 -
Apr1g2595 732 MobiDBLite consensus disorder prediction 707 732 - -
Apr1g2595 732 Gene3D Jelly Rolls 503 623 IPR014710 -
Apr1g2595 732 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 729 - -
Apr1g2595 732 Gene3D Helix hairpin bin 433 496 - -
Apr1g2595 732 Gene3D - 111 430 - -
Apr1g2595 732 Pfam Cyclic nucleotide-binding domain 527 616 IPR000595 -
Apr1g2595 732 Pfam Ion transport protein 108 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr1g2595 732 CDD CAP_ED 505 636 IPR000595 -
Apr1g2595 732 ProSiteProfiles cAMP/cGMP binding motif profile. 505 635 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2595 Apr-Chr1 35390200 35398027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2595 1 730 Ion Channels AT2G23980 76.267 0.0 1155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2595 K05391 - gmx:100820202 1376.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2595 1 35390200 35398027 Apr1g2595 1 35390200 35398027 ECH