Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2589 ATGGAAGACGAAGAAGAGACGCGCCACCGAGTTACTGACTCGTCACTCGCCACCGAGTCACACGCTTCCACTCCTCCCCATGACCTGCCACGCAATTCTGAAACCCTAGTTATTCCCTCTTCGTTCACGCACCACCACGCTATTACTCCAGATATGCAGGGAAGCTCTACCGCGCGTAAACGTCGCAAAGACGAAAGTAAGGAGCCAGCTCAACCTCCTGATGAAGAAACTATTGTAAGCGATGCAGTTGAGGCGCCTCAGAAACTTACAGAAAAGTCTGTTTGTTCAAGTTCATTCTCTGAACTATCACCAACTTCTGCTTCACAGTCTTTATCATCTGCCCCTAGTCCGACTTTACCAGAACAGAGGCTGTCTTCTCCTAAGACTAACAGTGTACAAGTGCTGGCAGTAGACAAAAGAACTACTTCTGGTGGCAAAACCTTGCCTTCTGTTTCTGTTGAAAGTGGATCTGCATCTGATGGATACAACTGGCGTAAATATGGTCAGAAGCAAGTGAAGAGTCCGACAGGTTCCCGAAGCTATTACAGGTGTACCCATTCAAATTGTTATGCTAAGAAGATTAAATTCTGTGACCATTCAGGTCATGTGATAGAGATTGTTTATAGAAGTCAACATAGTCATGATCCCCCACATAAGACTGATTTCACCAAGGAAAGTAAATTCATGCCTTCCAATGAACCTAAAGTAGAAAGCACTGTTCCAAAGCAGTCTATCAGAGTTCTGAATGATTCTGATCAATCATCTTCTCCAAAAGAACCTCTACAAAAAGTACCTTGCAGTGCTGATAAGAAACTACAAAATTCATCTAACGGTGAGAATGGTAAAGTTATGTTGAAGGAAGAGCATGTTGATGACCCAGAGCCCAAAAGAAGAATGAACAAAAGTGATTTAACAAGCTTGGATTCAACAGTAAAACCAGGAAAGAAACCAAAGTTAGTTGTACATGCAGCTGGGGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAATATGGACAAAAAATGGTGAAGGGGAATCCACATTTCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAAACTGCTGTGGATAACTCAAAAGCTCTCATCATAACATACAAGGGAGTACATGATCATGACATGCCTGTGCCCAAGAAACGACATGGCCCACCAAGTGCACCCCTCGTGGCTGCTGCAGCACCTGCTTCAATGAACAATATGCAGTTCAAGAAAACTGACTTACTGCAAAACCGGAAAACACCTACTCGATGGTCAGTTGATACCGAAGGAGAATTAACCGGAGAAGCTTTGGACCTTGGGGGTGAGAAAGCAATTGAGTCAGCTCGAACTCTTTTGAGCATAGGTTTTGAAATTAAACCTTGTTGA 1410 0.439 MEDEEETRHRVTDSSLATESHASTPPHDLPRNSETLVIPSSFTHHHAITPDMQGSSTARKRRKDESKEPAQPPDEETIVSDAVEAPQKLTEKSVCSSSFSELSPTSASQSLSSAPSPTLPEQRLSSPKTNSVQVLAVDKRTTSGGKTLPSVSVESGSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCYAKKIKFCDHSGHVIEIVYRSQHSHDPPHKTDFTKESKFMPSNEPKVESTVPKQSIRVLNDSDQSSSPKEPLQKVPCSADKKLQNSSNGENGKVMLKEEHVDDPEPKRRMNKSDLTSLDSTVKPGKKPKLVVHAAGDVGISGDGYRWRKYGQKMVKGNPHFRNYYRCTSAGCPVRKHIETAVDNSKALIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNMQFKKTDLLQNRKTPTRWSVDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2589 469 MobiDBLite consensus disorder prediction 1 158 - -
Apr1g2589 469 MobiDBLite consensus disorder prediction 1 15 - -
Apr1g2589 469 MobiDBLite consensus disorder prediction 16 55 - -
Apr1g2589 469 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 467 IPR044810 GO:0003700
Apr1g2589 469 Pfam WRKY DNA -binding domain 160 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 Pfam WRKY DNA -binding domain 332 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 MobiDBLite consensus disorder prediction 209 313 - -
Apr1g2589 469 SUPERFAMILY WRKY DNA-binding domain 154 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 SMART WRKY_cls 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 SMART WRKY_cls 330 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 MobiDBLite consensus disorder prediction 282 303 - -
Apr1g2589 469 SUPERFAMILY WRKY DNA-binding domain 326 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 6 467 - -
Apr1g2589 469 MobiDBLite consensus disorder prediction 232 261 - -
Apr1g2589 469 ProSiteProfiles WRKY domain profile. 153 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 MobiDBLite consensus disorder prediction 209 231 - -
Apr1g2589 469 Gene3D WRKY domain 315 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 Gene3D WRKY domain 145 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr1g2589 469 MobiDBLite consensus disorder prediction 56 74 - -
Apr1g2589 469 MobiDBLite consensus disorder prediction 90 158 - -
Apr1g2589 469 ProSiteProfiles WRKY domain profile. 325 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2589 Apr-Chr1 35347753 35354475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2589 102 469 WRKY Transcription Factor Family AT4G30935 55.764 9.41e-125 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr1g2589 WRKY 2.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2589 - - gmx:100127388 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2589 1 35347753 35354475 Apr1g2589 1 35347753 35354475 ECH