Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2586 ATGGCGACGATGCGGAAATTGTTGTTTCAAAATCAAAAGCCACCAGAAGGCCTTCTGGAGATCTCTGAAAGAGTCTATGTATTTCACTGCTGTTTCGGCGCCAAACGGGACTGGAGCGAGGAGCGTTACGGAAATCACGTGAACGGGGTCGTTGGTAAGTTTCGACAAAACGCGCCCGAGGCTTCCGTTTTGGTGTGCAACTTCCGTAACGAAGAGACGAAGACAAAGATGTTCGACGTAAACGGCGTTACTCTGACGGAATATCCTCGGCACCACCTAGGTTGCCCCGTGCTCAAAATGGAGGACACGTGGCGGTTTCTAAGGTCGTGCAAGAACTGGCTTTCGCGCGAACACCGCAACGTTGTGTTAATGCACTGCGAACGAGGTTGTTGGCCTGTTTTGGCGTTCACATTGGCTGCATTGTTTGTGTTTGGGAAACACTACGAAGGAGAAAAGAGGAGTTTAGAAATGGTTTACGAACAGGCTCCACGTCAGCTTTTGCATTCCATGATGGCTATCAATCAAATCCCTTCGCAACTGAGGTATCTTCAATACGTTTCCACGTGGCATGGGGTGTTGGGTTTGCCTCTGTTGGAGAGGGTAATTAGGTTGGACTCTATTGTTCTAAGGTTTATGCCAGATTTTGATGGTCAAGCTCGTTCTTGTCCCATGTTTCGAATTTATGGACACGACCCTTTTGTTGCTGATGCAAATGCTAAATTATTGTGTTCCACACTCGAGAGAAGAAAAACTGTTCCAGCATATGAACAGGGAGATTGTGAAACAATGAAAGTCAATATTAATTGCCATATTCGAGGTGATGTCTTGATTGAGAGCATTAACCTGTATGGTGACATGGAGAGTGAACAGATGATGTTTCGAGCCATGTTCAACACGGCTTTTATTGGATCTAATATATTGTTGCTTAACCGGGATAAAATTGATGTTTTATGGTGTGCTAAAGATAATTTCCCAAAGGAATTTAGAGCAGAGATTCTTTTCTCGGAAATGGATGCTTCTACAGCTGTTCTTGAGAATGGCACCTCGTGCTTTAAGGAGAAGGAGGGGATGGATCCCAAGGAAAATACTTCACCACTAAATGTGCTCCAAAAGAAGTGTGCTTCACCTGCCGATACCATACATGAAAAGTTGAATGCAGGCTCAAATGAGCATGTGGAGAGTGGCAGTTTTTTGCATCAAAAAGGTCCTCAAATGCCTAAGGAGAAAAAGAATGAAGCAAATTGCTTTTTGTCTTCAAATTTGGGGAACCAGTTTGTGTCCTCAGCTAGGCAATGCCCAGATAACAATATGAGTAAAAAAGAGGATAAAATGATCAAGGATGATGAGTCTGACATTAGCCAAGTAATGTCAAGCCCTTTTGAAAGAACCTCGGAGTCCAACAACTGTGTAAAAGATTGTACAAATCTTTCAATAAAAGTACATCCATCTAATTCTGTGGACACCATTTCTAGTGGTCCAATTTCACCCCAAACACCTCCACTACGCCCTCCCTCAACTAGTAATGCTAAAGAAGTTCATGATTCTCCTCCTCACAAGGATTCACATCCTCATTATCATTTGCCTTTGAAATCAAGAGATGATCTTACTGAAGGAACTAAATCCCAATCACAAAATAAAAGTCAATCAATTATGTTTAGCTCTACAATAGGGACTCCAATCTTAAGTCCTTCCCATAATAAGTCACCAAATGGTTCTATTTCCCATGGTCCAGATTCTGTAATTACTTCAAATCAACCACCTCCTTTGAAGAAGATTTTACCTGTTAGAACAAAACTTGATTCTTTCCCTTCAAAATCTCAACCTCAAACACTGCCATCTGCTCCCCCTTCTCCACTAAAGAAGCATGAACAAATTAGAGTTGGAGATCCTCCATCCCCTCCAACTCCTCCACTAAAGGAACATGAACCACCTAGAGCTGGAATTCCTCCATCCCCTCCAACTCCACCTCTTAGTCCTTTAGTGAAAGTTTTAAGTCCTCCCAGTATAGAACCATTGGTGCCAGTGCCACCACCACCACCTCCAATCATTGCACATTCCTTTGATCACATTAATTCTTCATCTCCAAAGTCTCCACTTGTTCCTGCAGCGCCTGCTGCTCCACCACCTCCAACTTCCTTTCGTAAAGGAGGTATACCATTAGATCATGGTTTTCCTAGGTTACGTTCCATGGGTGGTGATGGGCATAATGGGTGTATTGGCTCAAACGGATCAGTTCTATCACATACAAATTCAATCAAAAGGTTAAAGCCATTGCATTGGTTGAAACTATCTAGAGCAGTGCAAGGTAGTTTGTGGGCAGAGACACAAAAGTCTTGTGAAGCTTCCAAAGCCCCAGAGATTGATATCTCAGAGCTTGAGAGTCTCTTTTCAACCACAACCCCAAGTTCAGCTCCTTCCAAGAAGTCAAACGTGAAAAGATCAGTTGGACCAAAATCTGATAAAGTGCAACTGATTGAGCATGCACGAGCATATAATTGTGAAATCCTTCTTTCAAAAGTAAAAGTGCCATTGCATGATTTAATGAGATCAGTGTTAGCACTAGACGAATCTGCATTAGACATTGATCAAGTTGAGAACCTGATAAAATTTTGTCCTACGAAGGAGGAGATAGAAATACTCAAGGATTATACCGGAGAAAAGGAGAAGCTCGGGAGATGTGAACAATTCTTCTTGGAGTTGATGAAGGTTCCACGAGTAGAATCTAAGTTCATAGTTTTTTCGGTCAAGATTCAATTTCACTCACAGGTTTCTGACCTTAAAAACAGCTTCAATGTAATTAATGATGCTTCAGAAGAGATCAGAAATTCTGTCAAATTAAAGAGAATCATGCAAACAATACTTTCTTTAGGAAATGCTTTGAACCAAGGAACTGCCAAGGGCTCTGCCATTGGATTCAGATTGGACAGTCTTCTTAAACTCACTGAGACACGTGCGCAGAACAAAAACATAACTCTCATGAATTATCTCTGTAAGGTTCTGACAGATAAGCTACCAGAAGTGTTAGATTTCTCCAAAGATCTTTCTAACCTTGAGCCAGCAGCAAAGATCCAACTGAAGTTGCTAGCAGAGGAGATGCGAGCTATAAGCCAAGGATTAGAGAGAGTTGAACATGAACTAACCATCTCTAAAAATGATGGTCCTGTGTCAGAAACTTTTTGCAAGAATTTGAAAGAATACCTTTCTTCTGCGAAGGCCGAAGTCTCTTCATTGGATTCACTATATTCTGTCATGGGTAGGAGTGTGGATGCTCTGATTATTTATTTTGGTGAAGATCCATCTCGCTGCCCTTTTGAGCAAGTTGTCACTACTTTGCTCAACTTTACTAGAATGTTCAACAAAGCCCATGAAGAAAACTGCAAGCTGCTTGAGTCTCGAAGAAAATAG 3405 0.4185 MATMRKLLFQNQKPPEGLLEISERVYVFHCCFGAKRDWSEERYGNHVNGVVGKFRQNAPEASVLVCNFRNEETKTKMFDVNGVTLTEYPRHHLGCPVLKMEDTWRFLRSCKNWLSREHRNVVLMHCERGCWPVLAFTLAALFVFGKHYEGEKRSLEMVYEQAPRQLLHSMMAINQIPSQLRYLQYVSTWHGVLGLPLLERVIRLDSIVLRFMPDFDGQARSCPMFRIYGHDPFVADANAKLLCSTLERRKTVPAYEQGDCETMKVNINCHIRGDVLIESINLYGDMESEQMMFRAMFNTAFIGSNILLLNRDKIDVLWCAKDNFPKEFRAEILFSEMDASTAVLENGTSCFKEKEGMDPKENTSPLNVLQKKCASPADTIHEKLNAGSNEHVESGSFLHQKGPQMPKEKKNEANCFLSSNLGNQFVSSARQCPDNNMSKKEDKMIKDDESDISQVMSSPFERTSESNNCVKDCTNLSIKVHPSNSVDTISSGPISPQTPPLRPPSTSNAKEVHDSPPHKDSHPHYHLPLKSRDDLTEGTKSQSQNKSQSIMFSSTIGTPILSPSHNKSPNGSISHGPDSVITSNQPPPLKKILPVRTKLDSFPSKSQPQTLPSAPPSPLKKHEQIRVGDPPSPPTPPLKEHEPPRAGIPPSPPTPPLSPLVKVLSPPSIEPLVPVPPPPPPIIAHSFDHINSSSPKSPLVPAAPAAPPPPTSFRKGGIPLDHGFPRLRSMGGDGHNGCIGSNGSVLSHTNSIKRLKPLHWLKLSRAVQGSLWAETQKSCEASKAPEIDISELESLFSTTTPSSAPSKKSNVKRSVGPKSDKVQLIEHARAYNCEILLSKVKVPLHDLMRSVLALDESALDIDQVENLIKFCPTKEEIEILKDYTGEKEKLGRCEQFFLELMKVPRVESKFIVFSVKIQFHSQVSDLKNSFNVINDASEEIRNSVKLKRIMQTILSLGNALNQGTAKGSAIGFRLDSLLKLTETRAQNKNITLMNYLCKVLTDKLPEVLDFSKDLSNLEPAAKIQLKLLAEEMRAISQGLERVEHELTISKNDGPVSETFCKNLKEYLSSAKAEVSSLDSLYSVMGRSVDALIIYFGEDPSRCPFEQVVTTLLNFTRMFNKAHEENCKLLESRRK* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2586 1134 Gene3D - 196 340 - -
Apr1g2586 1134 MobiDBLite consensus disorder prediction 512 539 - -
Apr1g2586 1134 MobiDBLite consensus disorder prediction 700 714 - -
Apr1g2586 1134 MobiDBLite consensus disorder prediction 693 715 - -
Apr1g2586 1134 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 204 337 IPR035892 -
Apr1g2586 1134 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 16 187 IPR029021 -
Apr1g2586 1134 Gene3D Protein tyrosine phosphatase superfamily 3 192 IPR029021 -
Apr1g2586 1134 SUPERFAMILY Formin homology 2 domain (FH2 domain) 676 1133 - -
Apr1g2586 1134 Pfam Formin Homology 2 Domain 750 1118 IPR015425 -
Apr1g2586 1134 SMART PTEN_C2_2 197 336 IPR014020 -
Apr1g2586 1134 SMART it6_source 745 1133 IPR015425 -
Apr1g2586 1134 ProSiteProfiles Formin homology-2 (FH2) domain profile. 745 1134 IPR015425 -
Apr1g2586 1134 MobiDBLite consensus disorder prediction 629 662 - -
Apr1g2586 1134 Coils Coil 1025 1045 - -
Apr1g2586 1134 MobiDBLite consensus disorder prediction 427 448 - -
Apr1g2586 1134 Gene3D Formin, FH2 domain 747 1128 IPR042201 -
Apr1g2586 1134 Pfam C2 domain of PTEN tumour-suppressor protein 201 336 IPR014020 -
Apr1g2586 1134 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Apr1g2586 1134 MobiDBLite consensus disorder prediction 540 586 - -
Apr1g2586 1134 MobiDBLite consensus disorder prediction 482 662 - -
Apr1g2586 1134 PANTHER FORMIN-J 1 1134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2586 Apr-Chr1 35327020 35335150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2586 1 357 Protein tyrosine phosphatase (PTP) family AT5G58160 51.524 3.37e-115 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2586 - - aprc:113848377 1191.79