Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2584 ATGGGTGACAAAGATGCAATTAACTCCACGTTGCTCCACGGGAAGTACGAGCTAGGTCGGTTACTGGGACACGGAACGTTCGCGAAGGTGTACCACGCACGGAACCTCAAAACCGGAAGGAGCGTGGCCATGAAGGTGGTGGGGAAAGAGAAGGTTATGAAGGTTGGGATGATGGAGCAGATAAAGAGAGAGATCTCCGCCATGAACATGGTGAAGCACCCCAACATCGTGCAGCTCCATGAAGTCATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAACTCGTTCGCGGCGGAGAACTCTTCAACAAGATCGCGAGGGGTCGATTGAGGGAAGAAGTTGCGAGACTGTACTTCCAGCAACTCATCTCCGCCGTCGATTTCTGCCACAGCCGCGGCGTCTTCCACCGCGACCTCAAGCCGGAGAATCTCCTCCTCGACGAAGAAGGGAACCTCAAGGTCACCGACTTCGGCCTCAGCACCTTCTCGGAGCATCTCTGGCACGACGGTTTGTTGCACACCACGTGCGGCACGCCGGCGTACGTGGCGCCGGAGGTCATCGGAAAAAAAGGCTACGACGGCGCTAAGGCTGATATTTGGTCTTGTGGAGTCATTCTTTATGTTCTTCTGGCAGGGTTTCTACCGTTCCAAGATGAGAATCTGGTGGCTATGTATAAGAAAATTTACAGAGGAGACTTCAAATGTCCACCGTGGTTTTCATCTGAAGCGCGGCGTTTAATTACAAAGTTGCTTGACCCGAACCCGAATACCCGAATCACGATTTCGAAGATTATGGACTCATCGTGGTTTAAGAAACCGGTGCCAAAGAGCATGATGGAAAGGAGAAAAAATGAGATGGAAGAGGAGATGAGGTTCGCAACGACGAGGCCTGCAAGCAGCGTGATTTCGAGGTTGGAGGAGGTGGCGAAGGCGGTGAAATTCGACGTTAAGAAGAGCGACACTAAGGTGAGGTTGCAGGGTCAAGAGCGAGGGCGTAAAGGGAAATTGGCTATTGCTGCGGATATTTACGCCGTTACGCCGTCGTTTTTGGTGGTTGAGGTTAAGAAGGATAATGGTGATACCTTGGAGTATAACCAGTTCTGCAGTAAGGAGCTTCGTCCTGCTCTTAAAGACATTGTCTGGAGGGCTTCCCCTCCCGAGAATCCCACGCCTGCTTGA 1179 0.5208 MGDKDAINSTLLHGKYELGRLLGHGTFAKVYHARNLKTGRSVAMKVVGKEKVMKVGMMEQIKREISAMNMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREEVARLYFQQLISAVDFCHSRGVFHRDLKPENLLLDEEGNLKVTDFGLSTFSEHLWHDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDENLVAMYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNTRITISKIMDSSWFKKPVPKSMMERRKNEMEEEMRFATTRPASSVISRLEEVAKAVKFDVKKSDTKVRLQGQERGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWRASPPENPTPA* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2584 392 CDD STKc_SnRK3 15 269 - -
Apr1g2584 392 Gene3D Phosphorylase Kinase; domain 1 13 97 - -
Apr1g2584 392 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 285 - -
Apr1g2584 392 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 278 389 - -
Apr1g2584 392 Gene3D Kinase associated domain 1, KA1 273 382 - -
Apr1g2584 392 Gene3D Transferase(Phosphotransferase) domain 1 98 272 - -
Apr1g2584 392 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2584 392 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2584 392 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2584 392 Pfam NAF domain 287 318 IPR004041 GO:0007165
Apr1g2584 392 Coils Coil 276 296 - -
Apr1g2584 392 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Apr1g2584 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Apr1g2584 392 CDD CIPK_C 282 377 - -
Apr1g2584 392 PANTHER - 278 389 - -
Apr1g2584 392 PANTHER - 8 285 - -
Apr1g2584 392 SUPERFAMILY Protein kinase-like (PK-like) 13 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2584 Apr-Chr1 35300353 35302310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2584 2 385 CBL-interacting serine-threonine protein kinases AT4G30960 69.606 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr1g2584 Pkinase 4.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2584 - K07198 gmx:547644 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2584 1 35300353 35302310 Apr1g2584 1 35300353 35302310 ECH