Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2573 ATGGTCTCCAAAATTGCCATTGCGCATGTTCTATTCCAGGTTTTTCTCTGCCAAAAGTTTCAACCTTTAGAAGCACAAACTTGGGTACAAGCTGGTTATTGGTATTCTGGGAGTGGATTTCCCATTTCAGATATCAACTCAGCTCTATATACTCACCTCATATGTGCTTTTGCTGAAGTGAACTCTTCTTCATATGAGCTCTCTGTCTCCCCAGATGATGAGCAATCCTTCTCTTCATTCACAGCTACTGTCAAACAAAAGAACCCATCCATCACTACACTTCTTTCCATTGGTGGTGGAAATGGTAATTACACTGTCTTATCATCAATGGTACGCAGTTCTTCTTCAAGGAAATCTTTCATTCAATCTTCAATAAAAATAGCCATGCTTTATGGGTTTCAAGGCTTGGACCTGTCTTGGGCTACTGTTGAGACAAGTTCTGACACGAGCAATATGGGAAGGCTTTTTGAAGAGTGGAGAGCAGCAGCAAAATCTGAGGCAGAAAATAACTCTTCTACTACTGAGTTGATCTTAACTGCATCTGTTCAATTTAGACCAGTTTTGGCTTTTTCATCTTACCCGGTGGAGTCTATTCAGAGTAACTTGAATTGGGTAACTGTTATGGCCTTTGATTACTACATGCCCCAGCGGACAAATTTTACTGCTGCATTTGCAGCCTTGTATGACCCTTCAAGTTATGTAAACACAGACAGTGGTATAAAGGAATGGATTGGTAGTGGAGTAGCAGCTAACAAGTTGATTTTGGGGTTTGCTTTCTATGGATATGCTTGGAAACTTAGAAACTCCAAGGAAAATTCAATAGGTGCATCAGCAACAGGTCCAGCAATTACAGAAGGGGGAGATATGAGCTATAAGGATATTAAGGCTTATATTCAACGATATGGAGCTATAGTCCTGTACAATGCTACTTATGTAGTCAATTACTTCTCCGTTGGATCAACTTGGATAGATTTTGATGATGTTGAGGTCATCAAAATTAAGGTGTCTTATGCCAAGGAAAAGAAGTTGCTTGGTTACGCTGTGTGGCAAGTTCCTTATGATGACAATTGGGTGCTTTCTAGTGCTGCAGCTGAACAGGTTGACCAAAATAGACACCATAGTCGGCGATTATTAGTGATAATTTTGATCACAACCTCTCTGTCTATTCTCCTATTCGGCATCTTAATTTACTACCTAAGGAGGAGATTCTTCAAACCAACAGTTAATGCATCCAGAAATTCAAGATCTAATGTGAATAAAGACGCTTCAGAACTTTTTCACGGCAATGCTCCTGATTTACAAGTTTTCAGCTATTCTGATATTGTGCTGGCTACTGATGGATTTTCAATTGAAAAAAAGCTTGGCCAGGGTGGCTATGGTCCTGTTTACAAGGGCATCCTACCTGATGGTCAAGAAATAGCTGTGAAAAAGCTATCTAAAGCATCTACACAAGGATTTGAAGAATTCAAAACTGAAGTGATGTTAACTGCTAGACTTCAACATGTGAATCATGTTCGGCTGTTGGGTTACTATATTGACGGAGAAGAACAAATGTTGATCTACGAATACATGCCAAACAAAAGCCTAGACTTCTACCTATTTGACCCTATGAGGAAGTTCCTTCTGGATTGGGGAAAACGCATAGATATCATTGAAGGAATTATTCAGGGGCTTCTTTATCTACAAGAATATTCTAGATTGACAATAATCCATAGAGACATAAAAGCTAGCAATATTTTGTTAGACAGTGAGATGAAACCAAAAATCTCAGACTTTGGTATGGCAAGGATATTCAGAAAAGACAAACATGAAGCAAACACTAGCAAAATTGTGGGAACATATGGTTATGTTTCTCCTGAATATGTTATGAAAGGCTTGTATTCTACTAAATCCGATGTGTACAACTTTGGGGTTCTACTTCTACAAATTGTAAGTGGTAGGAAGGTGGCATGCCTTTATGGTGAACATGAAAATTTAAACCTTATGGAGTATGCTTATGAGCTTTGGAAAGAAGGGAAAGGCATGGATTTTACGGACCCTTCACTTGATGACATGAGTTCAACATGTAAACTATTAAAGTGCATGCAAATAGCTCTATTATGCGTGCAAGAAGATGCAAATGATAGACCCTCTGTGAAGGAAATTTCTTCAATGTTGAAAAATGACAATATTCAGACAATTCCCAAAAGGCCTGCATTTTCAACAAATAAAGCTCCGAATGAATTTATTATGCATCGAGAAAAATGTTCAGTCAACGATGCATCAATCTCTGAAGCTGTGGCTCGATAG 2289 0.3871 MVSKIAIAHVLFQVFLCQKFQPLEAQTWVQAGYWYSGSGFPISDINSALYTHLICAFAEVNSSSYELSVSPDDEQSFSSFTATVKQKNPSITTLLSIGGGNGNYTVLSSMVRSSSSRKSFIQSSIKIAMLYGFQGLDLSWATVETSSDTSNMGRLFEEWRAAAKSEAENNSSTTELILTASVQFRPVLAFSSYPVESIQSNLNWVTVMAFDYYMPQRTNFTAAFAALYDPSSYVNTDSGIKEWIGSGVAANKLILGFAFYGYAWKLRNSKENSIGASATGPAITEGGDMSYKDIKAYIQRYGAIVLYNATYVVNYFSVGSTWIDFDDVEVIKIKVSYAKEKKLLGYAVWQVPYDDNWVLSSAAAEQVDQNRHHSRRLLVIILITTSLSILLFGILIYYLRRRFFKPTVNASRNSRSNVNKDASELFHGNAPDLQVFSYSDIVLATDGFSIEKKLGQGGYGPVYKGILPDGQEIAVKKLSKASTQGFEEFKTEVMLTARLQHVNHVRLLGYYIDGEEQMLIYEYMPNKSLDFYLFDPMRKFLLDWGKRIDIIEGIIQGLLYLQEYSRLTIIHRDIKASNILLDSEMKPKISDFGMARIFRKDKHEANTSKIVGTYGYVSPEYVMKGLYSTKSDVYNFGVLLLQIVSGRKVACLYGEHENLNLMEYAYELWKEGKGMDFTDPSLDDMSSTCKLLKCMQIALLCVQEDANDRPSVKEISSMLKNDNIQTIPKRPAFSTNKAPNEFIMHREKCSVNDASISEAVAR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2573 762 SMART 2g34 28 354 IPR011583 GO:0008061
Apr1g2573 762 Gene3D Transferase(Phosphotransferase) domain 1 524 733 - -
Apr1g2573 762 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19 22 756 - -
Apr1g2573 762 SUPERFAMILY Protein kinase-like (PK-like) 432 732 IPR011009 -
Apr1g2573 762 SUPERFAMILY Chitinase insertion domain 260 325 IPR029070 -
Apr1g2573 762 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 756 - -
Apr1g2573 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
Apr1g2573 762 CDD GH18_plant_chitinase_class_V 26 360 - -
Apr1g2573 762 Gene3D Phosphorylase Kinase; domain 1 407 523 - -
Apr1g2573 762 SMART serkin_6 448 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2573 762 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 370 IPR001223 GO:0005975
Apr1g2573 762 Pfam Protein kinase domain 449 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2573 762 Gene3D Glycosidases 42 356 - -
Apr1g2573 762 Gene3D - 259 325 IPR029070 -
Apr1g2573 762 SUPERFAMILY (Trans)glycosidases 29 367 IPR017853 -
Apr1g2573 762 Pfam Glycosyl hydrolases family 18 32 354 IPR001223 GO:0005975
Apr1g2573 762 ProSiteProfiles Protein kinase domain profile. 448 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2573 Apr-Chr1 35203109 35207392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2573 377 733 Receptor kinase-like Gene Family AT4G05200 48.747 4.37e-109 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr1g2573 Glyco_hydro_18 1.6e-60 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2573 - - gmx:100787480 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2573 1 35203109 35207392 Apr1g2573 1 35203109 35207392 ECH