Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g2573 | ATGGTCTCCAAAATTGCCATTGCGCATGTTCTATTCCAGGTTTTTCTCTGCCAAAAGTTTCAACCTTTAGAAGCACAAACTTGGGTACAAGCTGGTTATTGGTATTCTGGGAGTGGATTTCCCATTTCAGATATCAACTCAGCTCTATATACTCACCTCATATGTGCTTTTGCTGAAGTGAACTCTTCTTCATATGAGCTCTCTGTCTCCCCAGATGATGAGCAATCCTTCTCTTCATTCACAGCTACTGTCAAACAAAAGAACCCATCCATCACTACACTTCTTTCCATTGGTGGTGGAAATGGTAATTACACTGTCTTATCATCAATGGTACGCAGTTCTTCTTCAAGGAAATCTTTCATTCAATCTTCAATAAAAATAGCCATGCTTTATGGGTTTCAAGGCTTGGACCTGTCTTGGGCTACTGTTGAGACAAGTTCTGACACGAGCAATATGGGAAGGCTTTTTGAAGAGTGGAGAGCAGCAGCAAAATCTGAGGCAGAAAATAACTCTTCTACTACTGAGTTGATCTTAACTGCATCTGTTCAATTTAGACCAGTTTTGGCTTTTTCATCTTACCCGGTGGAGTCTATTCAGAGTAACTTGAATTGGGTAACTGTTATGGCCTTTGATTACTACATGCCCCAGCGGACAAATTTTACTGCTGCATTTGCAGCCTTGTATGACCCTTCAAGTTATGTAAACACAGACAGTGGTATAAAGGAATGGATTGGTAGTGGAGTAGCAGCTAACAAGTTGATTTTGGGGTTTGCTTTCTATGGATATGCTTGGAAACTTAGAAACTCCAAGGAAAATTCAATAGGTGCATCAGCAACAGGTCCAGCAATTACAGAAGGGGGAGATATGAGCTATAAGGATATTAAGGCTTATATTCAACGATATGGAGCTATAGTCCTGTACAATGCTACTTATGTAGTCAATTACTTCTCCGTTGGATCAACTTGGATAGATTTTGATGATGTTGAGGTCATCAAAATTAAGGTGTCTTATGCCAAGGAAAAGAAGTTGCTTGGTTACGCTGTGTGGCAAGTTCCTTATGATGACAATTGGGTGCTTTCTAGTGCTGCAGCTGAACAGGTTGACCAAAATAGACACCATAGTCGGCGATTATTAGTGATAATTTTGATCACAACCTCTCTGTCTATTCTCCTATTCGGCATCTTAATTTACTACCTAAGGAGGAGATTCTTCAAACCAACAGTTAATGCATCCAGAAATTCAAGATCTAATGTGAATAAAGACGCTTCAGAACTTTTTCACGGCAATGCTCCTGATTTACAAGTTTTCAGCTATTCTGATATTGTGCTGGCTACTGATGGATTTTCAATTGAAAAAAAGCTTGGCCAGGGTGGCTATGGTCCTGTTTACAAGGGCATCCTACCTGATGGTCAAGAAATAGCTGTGAAAAAGCTATCTAAAGCATCTACACAAGGATTTGAAGAATTCAAAACTGAAGTGATGTTAACTGCTAGACTTCAACATGTGAATCATGTTCGGCTGTTGGGTTACTATATTGACGGAGAAGAACAAATGTTGATCTACGAATACATGCCAAACAAAAGCCTAGACTTCTACCTATTTGACCCTATGAGGAAGTTCCTTCTGGATTGGGGAAAACGCATAGATATCATTGAAGGAATTATTCAGGGGCTTCTTTATCTACAAGAATATTCTAGATTGACAATAATCCATAGAGACATAAAAGCTAGCAATATTTTGTTAGACAGTGAGATGAAACCAAAAATCTCAGACTTTGGTATGGCAAGGATATTCAGAAAAGACAAACATGAAGCAAACACTAGCAAAATTGTGGGAACATATGGTTATGTTTCTCCTGAATATGTTATGAAAGGCTTGTATTCTACTAAATCCGATGTGTACAACTTTGGGGTTCTACTTCTACAAATTGTAAGTGGTAGGAAGGTGGCATGCCTTTATGGTGAACATGAAAATTTAAACCTTATGGAGTATGCTTATGAGCTTTGGAAAGAAGGGAAAGGCATGGATTTTACGGACCCTTCACTTGATGACATGAGTTCAACATGTAAACTATTAAAGTGCATGCAAATAGCTCTATTATGCGTGCAAGAAGATGCAAATGATAGACCCTCTGTGAAGGAAATTTCTTCAATGTTGAAAAATGACAATATTCAGACAATTCCCAAAAGGCCTGCATTTTCAACAAATAAAGCTCCGAATGAATTTATTATGCATCGAGAAAAATGTTCAGTCAACGATGCATCAATCTCTGAAGCTGTGGCTCGATAG | 2289 | 0.3871 | MVSKIAIAHVLFQVFLCQKFQPLEAQTWVQAGYWYSGSGFPISDINSALYTHLICAFAEVNSSSYELSVSPDDEQSFSSFTATVKQKNPSITTLLSIGGGNGNYTVLSSMVRSSSSRKSFIQSSIKIAMLYGFQGLDLSWATVETSSDTSNMGRLFEEWRAAAKSEAENNSSTTELILTASVQFRPVLAFSSYPVESIQSNLNWVTVMAFDYYMPQRTNFTAAFAALYDPSSYVNTDSGIKEWIGSGVAANKLILGFAFYGYAWKLRNSKENSIGASATGPAITEGGDMSYKDIKAYIQRYGAIVLYNATYVVNYFSVGSTWIDFDDVEVIKIKVSYAKEKKLLGYAVWQVPYDDNWVLSSAAAEQVDQNRHHSRRLLVIILITTSLSILLFGILIYYLRRRFFKPTVNASRNSRSNVNKDASELFHGNAPDLQVFSYSDIVLATDGFSIEKKLGQGGYGPVYKGILPDGQEIAVKKLSKASTQGFEEFKTEVMLTARLQHVNHVRLLGYYIDGEEQMLIYEYMPNKSLDFYLFDPMRKFLLDWGKRIDIIEGIIQGLLYLQEYSRLTIIHRDIKASNILLDSEMKPKISDFGMARIFRKDKHEANTSKIVGTYGYVSPEYVMKGLYSTKSDVYNFGVLLLQIVSGRKVACLYGEHENLNLMEYAYELWKEGKGMDFTDPSLDDMSSTCKLLKCMQIALLCVQEDANDRPSVKEISSMLKNDNIQTIPKRPAFSTNKAPNEFIMHREKCSVNDASISEAVAR* | 763 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g2573 | 762 | SMART | 2g34 | 28 | 354 | IPR011583 | GO:0008061 | |
Apr1g2573 | 762 | Gene3D | Transferase(Phosphotransferase) domain 1 | 524 | 733 | - | - | |
Apr1g2573 | 762 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19 | 22 | 756 | - | - | |
Apr1g2573 | 762 | SUPERFAMILY | Protein kinase-like (PK-like) | 432 | 732 | IPR011009 | - | |
Apr1g2573 | 762 | SUPERFAMILY | Chitinase insertion domain | 260 | 325 | IPR029070 | - | |
Apr1g2573 | 762 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 22 | 756 | - | - | |
Apr1g2573 | 762 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 569 | 581 | IPR008271 | GO:0004672|GO:0006468 | |
Apr1g2573 | 762 | CDD | GH18_plant_chitinase_class_V | 26 | 360 | - | - | |
Apr1g2573 | 762 | Gene3D | Phosphorylase Kinase; domain 1 | 407 | 523 | - | - | |
Apr1g2573 | 762 | SMART | serkin_6 | 448 | 719 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g2573 | 762 | ProSiteProfiles | Glycosyl hydrolases family 18 (GH18) domain profile. | 28 | 370 | IPR001223 | GO:0005975 | |
Apr1g2573 | 762 | Pfam | Protein kinase domain | 449 | 716 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g2573 | 762 | Gene3D | Glycosidases | 42 | 356 | - | - | |
Apr1g2573 | 762 | Gene3D | - | 259 | 325 | IPR029070 | - | |
Apr1g2573 | 762 | SUPERFAMILY | (Trans)glycosidases | 29 | 367 | IPR017853 | - | |
Apr1g2573 | 762 | Pfam | Glycosyl hydrolases family 18 | 32 | 354 | IPR001223 | GO:0005975 | |
Apr1g2573 | 762 | ProSiteProfiles | Protein kinase domain profile. | 448 | 733 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g2573 | Apr-Chr1 | 35203109 | 35207392 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g2573 | 377 | 733 | Receptor kinase-like Gene Family | AT4G05200 | 48.747 | 4.37e-109 | 346 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Apr1g2573 | Glyco_hydro_18 | 1.6e-60 | CL0058 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g2573 | - | - | gmx:100787480 | 1168.68 |