Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2551 ATGGCGTTTGACCAAAACTCCATCCCCGGCGATGCTGTGCGGCCGCTGAACGTGGCGCGAAGTGTGGCCGAAGAGCCACTCCTTTTGCCGACGAGTACGACGGTTCCCGGCGCGGTGCCCCTTTTCTACCCTGCGTCTGTCTCTGATGCTGGCATGGTGGGAATAGGGTATGGAAATGTGGCTTCGGGTGCTGCTGCTGCCGCCACGTGGTGTGTTCGTCCCTCTATGCCTATTCTCCATTCCTCTGTGAGCCCTGCTGTTGGGTTCTCTCATGTTCCTAGTTTTACCAATAGGGTTGCTGGTGGCAATGCAGTTGATGTTTCAGGTAATTTTGTGGCTGCTTCTCATGGGTATCCTGTGAATTTAGGGGGCAACTGGGTTGCGGGTAATGGCTTGAGTAATAATAATATTAGTAGTAATAACGGTCTTCAGGGAAATAGCAGAGTAATTGGCAATGCTAGTGATAATGTTGTTGGTGTCGGGGCACTTGGGGTTGGTTCAAATCCCCCTGCTAGTCAGCGGGTTGATCAGGCAAGTGAGGAGGGTGGGGATGATTCAGTTTCCGGGCGAAAGATGAAGCTTTTGTGCAGTTACGGGGGGAAAATTTTGCCTAGGCCAAGCGATGGAATGCTGAGATATGTTGGAGGTCAAACGAGGATCATAAGTGTTAAGAGAGATGTGAGCTTCAACGATTTGGTGCAAAAGATGGTTGATACTTTTGGGCAACCTGTGGTTATCAAATATCAACTCCCAGATGAGGATCTTGATGCTCTGGTCTCGGTTTCCTGCCCCGACGATCTAGAAAACATGATGGAGGAGTATGAGAGATTAATTGAGAGGTCTCCTGATGGTTCGCCTAAACTAAGGGTTTTTCTATTCTCTTCTTTAGAACTTGATCCTTCTGGTGTGGTACAGTTTGTAAATTTACATGATGGTGGGCTGAAATATGTTGAAGCTGTGAATGGAATTTCGGATGGGATTGGTGGTAAACTCACAAGGAAAGCCAGTTATGCAAGTGCAACTTCTACCCAAAATTCTGATTTGAGCGGCATAGATGCTCTTGATAGCTCAAATGCTACTCAAGGAGATGTCAGTGTGGTACCTGTACCACAGTCTGGCGGTTTATCACCTGAGGGGAATGCAGCTGCTTCTCATGACACTACTGCAAATTTTGTGGTTTCTGAGCCAGGTGCATCAATTTACTCAGATGCTTCTGCAGTTTCATTGGGCATTCCTGTGACTAATTCTGTCCCAACTCACACTCCTCCTTTCCAGAATGATGTTGAGTTGGAAAAATCTCTACCTGTTACTTTTTCTCAGCAGCAATTTGGGGTGCTGCAGTCTGGATTGGAAATTCCATCACCTGCGCGTTTACAGCCTTTTGTTGATCCTCGTCATGAAGTTGTGAACCATGCAGATTACGTCCAGCTGCCTCCTCATATGGGATTTCCAAATGCCCACCTTTTAGGTAAGTCTGGCCCTATCTACTCCCAACAGCAGTTTCATGATACCACTTCTCGTTTAGGCTCCCTTCAGGTAATCCCTGCAGTGCAAATGACTATGACTCAGCCAACTTCTCATGCTGGTGTAAGTCCAAGTGTTATTCAACCACAACCATTCATGCAACCACAGCAAAACCTTTTGGATCAATATAATGATGAAAATACTTCAGGGCTAAGGATTTACCAGCTTCCTGCTGATCAAAGTTACAATGCATATCCGGTTCAAGTCCCTTTTGGAGGTCATTTTGGCTGGGTTAAGGTTCCTTCACCCGAGCATGTGATTTTTCCTGATGTGTTTGTGCCTCAACAATCAGCAATGATCCCTGAGAAAGTCCAAAGAGTGGAGGACTGTTATATGTGTCAGAAAAAGTTGCCTCATGCCCATTCGGATCCTGTGGTTCAAGAGCAGAGTAATAGCTGTGCTGGTCCAATTCCTGATTCAACTTCAAGTTTCCATAGTCTCCCTATGCAGGACAATTCAAGAGCTCAATCAACGAATGTGGTTTGGGTCACTGCACCAATGAAGGAAGGCAATGTTGAGCAAGCAGTTGGGACCAGACCCAGGGTCACTTCTAAATTGGATACTCCAGGTGGAATATCTTGTGTTGACACAGCTTCACTCTCTTTGGAGCCTGAAGGTGAGAGAATTTTTATACAAAAGCTGGACTGGTCTGATCATCCCACGAATGCAGTTATCCAGGAAGCAGTTGTAAGAACAGGTAAAAAACAGTCAACAAGTGATGGGCTGATGGGAACAGCTCTGCCGTCTTATCAAGATGATATCATCCGCCAACATATGGTGCCAGCTGAAAACTGGGCTAAAGAGGATGTGCTTGTAAATAAACCTGTTAATAATGATATACCTTTAGTTGGTGGCACATCTGTTGAAAGTTCTGAGTGTATGGTTCAACAATGTCCAACAGAATATACCAATGAAGCTAGCACAATGTCAAAAGCAGATGCTGTAGAGAATTGGATAGCACATGACCTACTCAAACCTATTGATGGAAGGATGGACAACCCAAAGATCGACAATCCTGAACTTTTTGTAAATAATGATAAATTTGATTACAACACTCAGCATGCTGTAGAGAAGAAAGGGGTGGTTCCAGAAAACAACCTTGACAAGTCACCATTGATCGTTGATGCAAATCAAATTAAGATGGTGAATGTGCTTCCTAGTTCTACAGTGGAAACTTCATATGGGAATAATTCCAGGCCGGTGGAATATAATGAGGTTGCACAACCCCCTGTTTGGGGCATTCCTGCATCAAATCCTCAATTAAAGAGTGGAAACCAGCACAAGGATGATGCAGTTTTACCTTCAGTTCCCCCATCTGTTAGGTTAGGAGATGTGCAGGATCCTTCAAACTCACTTTTTAGCAATCAGGATCTCTGGAATATACATGGGACCTACTTTCCACCTCCTAGACCTAAAAAAGTTGCATTGAAGAAAGAAACATATTCTTATAAGGATCAGCTTGGTGAGAATCCGGGAAACTGTGGGGAACAAAATTTAGAAGCTCAAATGGATAATGGCCACCAGACTTTCAAACAGCATTTAGAAGCTCAAATGGGTGATGGCATCTACCAGACATTCAAACAGAATTTAACTTTAGAAGAAGCTCAATCTTCCATGGTCTTGTCAGAAGACCGACAACTTCAAGCTGTTGCTGAAGGTTTAGCTGCTTCTGTTCTGCGCTCAAGCACTTCTTCAAATCTTGATTTGCATGCCAGAAATGTGTCCCTTTGTGAGGACATCGACAATGGAGTTGTTCAAAATAGTATAATAGATATACAGCATAAAGATAAAGCTCAGGATGTCAGAAGCAAGCTCCCAGAGAAGGCAAATTTTGGCTTTCCAGGATCGGATATTGGAGCATTGCAGTTTATAAAAAATTGTGACCTTGAAGAGCAGACGGAATTGGGTTCTGGGACCTTTGGGACTGTATATCACGGAAAATGGAGGGGTACTGATGTTGCAATAAAACGGATTAATGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCTTGAAAGCTGATTTTTGGAATGAGGCAATCAAGCTTGCTGACTTGCATCATCCAAATGTAGTGGCATTCTATGGTGTTGTGCTTGATGGCCCTGGCGGTTTTGTGGCAACAGTAACAGAGTTTATGGTCAATGGCTCTCTAAGAAATGCCTTGCAGAAGAATGGGAGGAATCTTGACAAGCGCAAGCGTCTTCTGATTGCAATGGATGTGGCCTTCGGTATGGAGTATCTGCATGGAAAAAACATTGTCCACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGTGATCCACACCGACCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTGAAATGCCAGACTTTAATATCTGGTGGTGTGAGAGGAACCCTACCTTGGATGGCCCCAGAACTACTGAATGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCGTTTGGTATTGTCATGTGGGAACTCCTAACCGGAGAAGAGCCATATGCTGATTTGCACTATGGGGCCATCATAGGTGGCATTGTAAACAACACTTTGCGGCCTCCAGTTCCAGAATCATGTGATCCTGAATGGAGACTGCTAATGGAGAGGTGCTGGTCATCAGAACCATCAGAAAGACCATCCTTCACTGTGATTGCCAACGAATTACGTTCCATGGCAGCCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTGCTTCATCAGAGAGTCAAGTACAGAAATGA 4284 0.4465 MAFDQNSIPGDAVRPLNVARSVAEEPLLLPTSTTVPGAVPLFYPASVSDAGMVGIGYGNVASGAAAAATWCVRPSMPILHSSVSPAVGFSHVPSFTNRVAGGNAVDVSGNFVAASHGYPVNLGGNWVAGNGLSNNNISSNNGLQGNSRVIGNASDNVVGVGALGVGSNPPASQRVDQASEEGGDDSVSGRKMKLLCSYGGKILPRPSDGMLRYVGGQTRIISVKRDVSFNDLVQKMVDTFGQPVVIKYQLPDEDLDALVSVSCPDDLENMMEEYERLIERSPDGSPKLRVFLFSSLELDPSGVVQFVNLHDGGLKYVEAVNGISDGIGGKLTRKASYASATSTQNSDLSGIDALDSSNATQGDVSVVPVPQSGGLSPEGNAAASHDTTANFVVSEPGASIYSDASAVSLGIPVTNSVPTHTPPFQNDVELEKSLPVTFSQQQFGVLQSGLEIPSPARLQPFVDPRHEVVNHADYVQLPPHMGFPNAHLLGKSGPIYSQQQFHDTTSRLGSLQVIPAVQMTMTQPTSHAGVSPSVIQPQPFMQPQQNLLDQYNDENTSGLRIYQLPADQSYNAYPVQVPFGGHFGWVKVPSPEHVIFPDVFVPQQSAMIPEKVQRVEDCYMCQKKLPHAHSDPVVQEQSNSCAGPIPDSTSSFHSLPMQDNSRAQSTNVVWVTAPMKEGNVEQAVGTRPRVTSKLDTPGGISCVDTASLSLEPEGERIFIQKLDWSDHPTNAVIQEAVVRTGKKQSTSDGLMGTALPSYQDDIIRQHMVPAENWAKEDVLVNKPVNNDIPLVGGTSVESSECMVQQCPTEYTNEASTMSKADAVENWIAHDLLKPIDGRMDNPKIDNPELFVNNDKFDYNTQHAVEKKGVVPENNLDKSPLIVDANQIKMVNVLPSSTVETSYGNNSRPVEYNEVAQPPVWGIPASNPQLKSGNQHKDDAVLPSVPPSVRLGDVQDPSNSLFSNQDLWNIHGTYFPPPRPKKVALKKETYSYKDQLGENPGNCGEQNLEAQMDNGHQTFKQHLEAQMGDGIYQTFKQNLTLEEAQSSMVLSEDRQLQAVAEGLAASVLRSSTSSNLDLHARNVSLCEDIDNGVVQNSIIDIQHKDKAQDVRSKLPEKANFGFPGSDIGALQFIKNCDLEEQTELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLKADFWNEAIKLADLHHPNVVAFYGVVLDGPGGFVATVTEFMVNGSLRNALQKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESCDPEWRLLMERCWSSEPSERPSFTVIANELRSMAAKISPKGQNQQQQPASSESQVQK* 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2551 1427 Gene3D Phosphorylase Kinase; domain 1 1131 1224 - -
Apr1g2551 1427 SUPERFAMILY CAD & PB1 domains 207 295 - -
Apr1g2551 1427 ProSiteProfiles Protein kinase domain profile. 1137 1404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2551 1427 Gene3D - 212 295 - -
Apr1g2551 1427 MobiDBLite consensus disorder prediction 361 383 - -
Apr1g2551 1427 CDD STKc_MAP3K-like 1143 1400 - -
Apr1g2551 1427 Gene3D Transferase(Phosphotransferase) domain 1 1225 1427 - -
Apr1g2551 1427 SMART PB1_new 206 295 IPR000270 GO:0005515
Apr1g2551 1427 SUPERFAMILY Protein kinase-like (PK-like) 1132 1398 IPR011009 -
Apr1g2551 1427 PANTHER SERINE-THREONINE PROTEIN KINASE 951 1409 - -
Apr1g2551 1427 PANTHER SERINE-THREONINE PROTEIN KINASE 152 935 - -
Apr1g2551 1427 ProSitePatterns Protein kinases ATP-binding region signature. 1143 1174 IPR017441 GO:0005524
Apr1g2551 1427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1262 1274 IPR008271 GO:0004672|GO:0006468
Apr1g2551 1427 MobiDBLite consensus disorder prediction 1407 1427 - -
Apr1g2551 1427 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 951 1409 - -
Apr1g2551 1427 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 152 935 - -
Apr1g2551 1427 Pfam Protein tyrosine and serine/threonine kinase 1138 1400 IPR001245 GO:0004672|GO:0006468
Apr1g2551 1427 MobiDBLite consensus disorder prediction 166 187 - -
Apr1g2551 1427 CDD PB1_UP2 195 293 - -
Apr1g2551 1427 PRINTS Tyrosine kinase catalytic domain signature 1219 1232 IPR001245 GO:0004672|GO:0006468
Apr1g2551 1427 PRINTS Tyrosine kinase catalytic domain signature 1256 1274 IPR001245 GO:0004672|GO:0006468
Apr1g2551 1427 PRINTS Tyrosine kinase catalytic domain signature 1327 1349 IPR001245 GO:0004672|GO:0006468
Apr1g2551 1427 PRINTS Tyrosine kinase catalytic domain signature 1371 1393 IPR001245 GO:0004672|GO:0006468
Apr1g2551 1427 MobiDBLite consensus disorder prediction 1406 1427 - -
Apr1g2551 1427 SMART serkin_6 1137 1408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2551 1427 Pfam PB1 domain 211 294 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2551 Apr-Chr1 35040950 35048844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2551 190 667 MAP Kinase Kinase Kinase AT3G46920 40.947 1.61e-87 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Apr1g2551 PK_Tyr_Ser-Thr 9.9e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2551 - - gmx:100776264 2213.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2551 1 35040950 35048844 Apr1g2551 1 35040950 35048844 ECH
Apr9g2617 9 33317465 33324280 Apr1g2551 1 35040950 35048844 PCT
Apr9g2735 9 34327908 34334914 Apr1g2551 1 35040950 35048844 PCT