Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2541 ATGTTGAGGCTGAAAGGAGGTAGCAGGCCACCGTGGGTGGGACTAGGCGCCGCCGTGTGGGTTCAGATTGCATCTGGAAACACTTTCACTTTCCCTCTTTACTCTCACTCTTTGAAATCAGTTTTGGGTTTCAACCAGCGCCAAGTCACTCTCCTCGGTGTCGCCAACGACATCGGCGAAAGCGTTGGCTTGATTCCCGGCATTGCCTGTAACAAGTTCCCTCCTTGGCTCATCCTTCTCGTTGGTTCCATCGCTTCCTTTCTCGGTTACGGTCTTCTCTGGCTCGCTATCAGCGACACCCTTCACTCCCTCCCTTACTTACTGCTATGGTTCGCGCTTGTTATTGCTGCTAACAGTAGCGCGTGGTTAACCACCGCGGTTCTGGTGACCAACATGAGAAACTTCCCTGCTAGTAGAGGCACTGTTGCGGGAATTTTGAAAGGTTATGGTGGGCTTAGTGCTGCGGTTTTTACTGAAATTTATAGTTTGGTGCTTCATAATTCTTCTTCCAACTTTCTCTTGCTTCTTGCAATTGGGATTCCTGTTATTTGCTTCAGCATGATGTTTCTTGTTAGGCCTTGTAACCCTGCAACCGGTGATGACCCTGCAGAGAGTTACCATTTTATGTTTATTCAAGGTTCTAGTGTGGTTTTGGGTGTGTATCTTCTTGCCACTACCATATTTGGTAATTTAATGCCGTTTAGTGGGGCGGTTTCGTATGTTTTGGTGGCTGTGATGATTCTTCTTCTCATGGCTCCACTTGCCGTCCCTGTGAAGATGACACTCTGTCCTAAGAAAGATTCCAAATCAGACTCGTCTGAGCAAAGAGTTGGATCTTCCGACTCGCTCACTCAAGGCAAAGATGAGAATGTGCAACCGCTGCTGGCGTCGTCGTCGGCTGGAACGCTTGGGAGTTTTTATGATCAGGATGAATTGTCTGAGGTGGCTGAGCTTCTTGCTTTGGGTGAGGGAGCAGTTAAGCAGAAGAAGAGAAGGCCTAAACGTGGGGAAGATTTTAAGTTTACTGAGGCTATAGTAAAGGCTGATTTCTGGTTACTGTTTTTTGTTTTCTTTGTTGGTGTTGGCACTGGTGTTACCGTTCTCAATAATCTAGCCCAAATTGGTATTGCACAAGGCGAGGAAGATACCACCACCTTGCTTTCCATTTTCAGTTTTTGCAATTTTGTGGGGAGGCTTGGTGGAGGAGTTGTTTCAGAGCATTTTGTCAGGTCAAAAACGATCCCAAGGACAGTCTGGATGACTTGCACACAGATAATTATGCTCGTCGTATACCTTCTGTTTGCCTTTGCTATCAAAGGAACCCTTTATCCTGCAGTTGCGTTTCTTGGTGTCTCCTATGGTGTGCAAGTTTCCGTAATGATCCCCACTGTTTCTGAGCTTTTTGGTTTGAAGCACTTTGGCGTATTGATCAACTTCATGACATTGGGGAATCCAATTGGTGCACTCCTTTTTTCAGCTCTGCTAGCAGGGTATGTATATGATAATGAGGCAGCAAAGCAGCATGGTATAGGCCTTATTGCTTCCTGTGTGGGTGCAAATTGCTTTAAGCTTACCTTTTTTGTTCTTGCTGGGGTGTGTGCTGTGGGCATCATCTTGAGCATTATCCTGACTTTGAGAATTAAGCCCGTTTACCAAATGCTTTATGCCGGAGGTTCTTTCAGGCTGCCTCAAACATCTTAA 1701 0.4621 MLRLKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGESVGLIPGIACNKFPPWLILLVGSIASFLGYGLLWLAISDTLHSLPYLLLWFALVIAANSSAWLTTAVLVTNMRNFPASRGTVAGILKGYGGLSAAVFTEIYSLVLHNSSSNFLLLLAIGIPVICFSMMFLVRPCNPATGDDPAESYHFMFIQGSSVVLGVYLLATTIFGNLMPFSGAVSYVLVAVMILLLMAPLAVPVKMTLCPKKDSKSDSSEQRVGSSDSLTQGKDENVQPLLASSSAGTLGSFYDQDELSEVAELLALGEGAVKQKKRRPKRGEDFKFTEAIVKADFWLLFFVFFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFVRSKTIPRTVWMTCTQIIMLVVYLLFAFAIKGTLYPAVAFLGVSYGVQVSVMIPTVSELFGLKHFGVLINFMTLGNPIGALLFSALLAGYVYDNEAAKQHGIGLIASCVGANCFKLTFFVLAGVCAVGIILSIILTLRIKPVYQMLYAGGSFRLPQTS* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2541 566 Gene3D MFS general substrate transporter like domains 12 200 IPR036259 -
Apr1g2541 566 Gene3D MFS general substrate transporter like domains 345 551 IPR036259 -
Apr1g2541 566 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 566 - -
Apr1g2541 566 SUPERFAMILY MFS general substrate transporter 15 195 IPR036259 -
Apr1g2541 566 MobiDBLite consensus disorder prediction 266 287 - -
Apr1g2541 566 SUPERFAMILY MFS general substrate transporter 211 549 IPR036259 -
Apr1g2541 566 Pfam Nodulin-like 11 258 IPR010658 -
Apr1g2541 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 566 - -
Apr1g2541 566 CDD MFS_Mch1p_like 10 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2541 Apr-Chr1 34952374 34955144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2541 5 566 Nodulin-like Gene Family AT1G80530 56.206 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2541 - - gmx:100794012 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2541 1 34952374 34955144 Apr1g2541 1 34952374 34955144 ECH
Apr9g2748 9 34447059 34449904 Apr1g2541 1 34952374 34955144 PCT