Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2521 ATGGCAGGAGCACTTGTGGGTGGAGCTTTTCTCTCTGGTTTTGTTAATGTTGTTTTTGATCGGCTTTTTTCACCTGAAGTTGCAAGCTTGATCCGAGGCAAGAAGCTTGACCATAAGTTAGTTGAAAGATTGAAAACTACCCTTTATGCTATTGAGGCTGTGCTTAATGATGCTGAAGACAAACAAATCAATGATCATGCTGTGAAGAAGTGGCTTCATGATCTCAGAGATGCTGTTTATGTGGCTGATGACTTGTTGGATGGTCTCTCTACTGAAGCTGCCACTCACGAGGAGGCAAGTAACTTTTTCTCTCGCGTTCTCAATTTGCGAGATAGAAAGGTGGTGAGTGAAATAGAAGACATCACTAGCAGGTTAGAGTATCTTGTTAACTTCAAAGATACTCTTGGTTTGAAAGAGATTCCAAGTGAGAACTTCTCATGGAGAACTGTATCAACATCTTTGCTTGAAGGATCTGGATCTGATATTTATGGAAGGGATCGAGATAAGGAGGGAATGAAAAAACTGTTGTTAGACGAGAGTAGTGAAGAAAATGTTTGTGTGATTCCTATTGTGGGCATGGGTGGTGTTGGAAAAACCACTTTAGTCCAGTGGTTGTACAATGATGAGAATTTGATGGGAAAGTTTGATTTGAAAGCATGGGTTTGTGTTTCTGAAGAATCTAATGTTGTTAACATTACAAAGGCTGTCATAGCGGCGGTTACTCGTGCTGCTTGTGATGCAAAGGATTTAAATTTACTTCAACTTGATTTGAAGGAAAAGTTGTCAGGGAAGAGGTTTTTGGTTGTTTTGGATGATGTTTGGAACATTGATCAACACGGTTGGAATAGTTTTAAAAAGCCTTTTCAATACGGGACTAAAGGAAGTAAAATTCTTGTGACAACTCGACTTGAAAAGGTTGCTTCAATACTCCAAACTGCTCCGCCGTACCGTCTACATGAGTTGTCGGATGAATATTGTTGGACAGTGTTTGCAAAGCATGCCCGTTTCCCAGAATCTGGTGGTGATTCAAATCTGGAAAGAATTGGTAAGGACATTGTAAAGAGGTGTCGAGGATTACCTTTGGCTGCAGAAACCCTTGGTTGTCTATTGCAAACAAAACATGATGTAGCGGATTGGAATACTATATTGACGAGTGAACTTTGGGAAATTCCAGTGGAAGATAGTAAAATAATACCAGCTCTGAAAATAAGTTATTACCATCTCCCTCCACATCTAAAACGTTGTTTTAACATTTTTAACTGCCCTATGTTGAAGTCATTACCTTCTCACATGAATACTCTGCTCCCTCGGTTAAATTCTCTTTCAATAAGAGATTGCCCTAACATTGATTCGTTTCCTGAAGGGGGTCTTCCGGCCGACTTGGCAACACTTCAGATTGTGAATTGCGAGAATCTATTGATGTGCCTATCATTAATAGGTGTGCACCGGGGTCTCACTGATTTAACCATTGGTGGTGCCAATTCATCCTTAAGGGAGGATTTGTTGCCTCAGCTTCCCTCTCTTGCCACTCTAATACTACACAAGTTTGAAACTATGGAGAAGATGGATTGCAACAGCCTTCTCCATCTCACCTCCCTTCAAGTTTTACGTATTGGCTACTGCCCCAAATTGAACAACATGGTGGGGGAAAGATTGCCTCTCTCTCTCATAAAACTCGAAATCGATCGGTCTCCTTTGTTGGCAGAACTGTGTGAGAAGAAGCATCCTCAAATTTGGGACAGAATTTCCCACATTTCTGGCATTCATGTTAACGGGAGATAG 1782 0.4097 MAGALVGGAFLSGFVNVVFDRLFSPEVASLIRGKKLDHKLVERLKTTLYAIEAVLNDAEDKQINDHAVKKWLHDLRDAVYVADDLLDGLSTEAATHEEASNFFSRVLNLRDRKVVSEIEDITSRLEYLVNFKDTLGLKEIPSENFSWRTVSTSLLEGSGSDIYGRDRDKEGMKKLLLDESSEENVCVIPIVGMGGVGKTTLVQWLYNDENLMGKFDLKAWVCVSEESNVVNITKAVIAAVTRAACDAKDLNLLQLDLKEKLSGKRFLVVLDDVWNIDQHGWNSFKKPFQYGTKGSKILVTTRLEKVASILQTAPPYRLHELSDEYCWTVFAKHARFPESGGDSNLERIGKDIVKRCRGLPLAAETLGCLLQTKHDVADWNTILTSELWEIPVEDSKIIPALKISYYHLPPHLKRCFNIFNCPMLKSLPSHMNTLLPRLNSLSIRDCPNIDSFPEGGLPADLATLQIVNCENLLMCLSLIGVHRGLTDLTIGGANSSLREDLLPQLPSLATLILHKFETMEKMDCNSLLHLTSLQVLRIGYCPKLNNMVGERLPLSLIKLEIDRSPLLAELCEKKHPQIWDRISHISGIHVNGR* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2521 593 Coils Coil 41 61 - -
Apr1g2521 593 Pfam NB-ARC domain 177 389 IPR002182 GO:0043531
Apr1g2521 593 Gene3D - 152 313 IPR027417 -
Apr1g2521 593 Gene3D - 320 403 IPR042197 -
Apr1g2521 593 SUPERFAMILY L domain-like 416 562 - -
Apr1g2521 593 Gene3D Ribonuclease Inhibitor 404 581 IPR032675 -
Apr1g2521 593 Pfam Rx N-terminal domain 11 100 IPR041118 -
Apr1g2521 593 PRINTS Disease resistance protein signature 187 202 - -
Apr1g2521 593 PRINTS Disease resistance protein signature 260 274 - -
Apr1g2521 593 PRINTS Disease resistance protein signature 356 370 - -
Apr1g2521 593 PRINTS Disease resistance protein signature 528 544 - -
Apr1g2521 593 Gene3D - 18 128 - -
Apr1g2521 593 PANTHER OS01G0808000 PROTEIN 9 417 - -
Apr1g2521 593 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 416 IPR027417 -
Apr1g2521 593 PANTHER DISEASE RESISTANCE PROTEIN RP 9 417 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2521 Apr-Chr1 34788742 34792521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2521 188 416 WRKY Transcription Factor Family AT5G45050 25.214 1.65e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2521 - - aprc:113852358 1186.02