Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g2473 | ATGGAAGAAAAAGTTGGAATAAAAAAATTGCTGGAAGATGAGGAAAGGCCATGTGATAAACTCTCCGTCCATAATTCTATGGGATCTACTCTTCTCAGCTTGAGCCTGAATAACTCAGAGCAGAAAACCCATCGAATTGAAGGACAGTCCCAAACCCAAATGGGCATGCTGCGAATCAAGCTTGAGGAAGCAAAGAAGGAGAATGAGATTTTAAGAGCTATGCTACATCAGGTCAATGAGCACTGCACCACTCTTCAAAATCGCATACTTTTGGCTATGCAGCAGCATCAACTATCTTCAGCATCACCTCGAAATAGTAATCATGACTTGCAGAGAGATCGAGAAGGTGCAGAGAAAGCTATGTTCACACGGCAGTTCTTGAATATTGGTGAGAAGAAAGTGGGAAGAAACATTGTGGATGATGAGTACAATGTTGAAGGTGAAATCAACAGCCAAATAACATCTAAAGAACCAAAACGCTCAGAAGATCAAGCATCTGAGGTTCCTTGCAGGAAAGCTAGAGTGTCCATAAGAGCACGATCAGATTTTTCTATGATGGGCGATGGATGTCAATGGAGAAAGTATGGACAAAAGACAGCAAAGGGAAACCCTTGCCCCCGAGCCTACTATCGTTGCAGCATGGGAACTGCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTCAAGGATGAGACTGTTCTCATCACAACCTATGAAGGGAACCATAACCATCCACTCCCACCAGCAGCCAGACCAATGGCAAGCTCAACATCAGCAGCATTGAACACGTTTCTTTCTGGCTCAATCACAAGTTCACATACCATCAGCACCCTATCAAACTCACACCTCTTCTCTTCATTGTCTAGTATTTCACCAACAGCTTTAGCTACTTTCTCCCCATCTGCAACATGTCCCACAGTAACACTGGACTTAACCCAACCTACTACCAATAACTATCTCCAATTCCAAAGAGCCACCACTTCACATGATCAAAGACAATCATTTTTCCCTTTACCACTAGATGGTCACCCTCAAACATATGAGGAGTTACACTTGTGTTCCAAGCTTCCAACCTTTATAACCCCAGAGAAAAGCCTTGCTTTGGTGGATGTAGTGAGTGAAGTTATGGTCAAAGATCCTTCTCTGAAGGCAGCATTGTTTGCAGCCATTTCCTCACTCACTGGAGATCATCCTCACAACAATAACATCAATAACAACAACCAAGATAATAAAAGTAGTGGTCACGACCCTTGTTCAAAGATGCCCGCAATACCACGTCATCATCCTTACACTACCCAGTTGATTTAG | 1308 | 0.4327 | MEEKVGIKKLLEDEERPCDKLSVHNSMGSTLLSLSLNNSEQKTHRIEGQSQTQMGMLRIKLEEAKKENEILRAMLHQVNEHCTTLQNRILLAMQQHQLSSASPRNSNHDLQRDREGAEKAMFTRQFLNIGEKKVGRNIVDDEYNVEGEINSQITSKEPKRSEDQASEVPCRKARVSIRARSDFSMMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGNHNHPLPPAARPMASSTSAALNTFLSGSITSSHTISTLSNSHLFSSLSSISPTALATFSPSATCPTVTLDLTQPTTNNYLQFQRATTSHDQRQSFFPLPLDGHPQTYEELHLCSKLPTFITPEKSLALVDVVSEVMVKDPSLKAALFAAISSLTGDHPHNNNINNNNQDNKSSGHDPCSKMPAIPRHHPYTTQLI* | 436 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g2473 | 435 | MobiDBLite | consensus disorder prediction | 151 | 171 | - | - | |
Apr1g2473 | 435 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 18 | 408 | - | - | |
Apr1g2473 | 435 | MobiDBLite | consensus disorder prediction | 395 | 435 | - | - | |
Apr1g2473 | 435 | ProSiteProfiles | WRKY domain profile. | 181 | 247 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr1g2473 | 435 | SUPERFAMILY | WRKY DNA-binding domain | 179 | 247 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr1g2473 | 435 | Coils | Coil | 54 | 81 | - | - | |
Apr1g2473 | 435 | MobiDBLite | consensus disorder prediction | 395 | 415 | - | - | |
Apr1g2473 | 435 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 18 | 408 | IPR044810 | GO:0003700 | |
Apr1g2473 | 435 | MobiDBLite | consensus disorder prediction | 153 | 171 | - | - | |
Apr1g2473 | 435 | Pfam | WRKY DNA -binding domain | 188 | 245 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr1g2473 | 435 | Gene3D | WRKY domain | 171 | 248 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr1g2473 | 435 | SMART | WRKY_cls | 186 | 246 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g2473 | Apr-Chr1 | 34326006 | 34332452 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g2473 | 47 | 393 | WRKY Transcription Factor Family | AT4G04450 | 36.000 | 1.97e-62 | 206 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Apr1g2473 | WRKY | 1e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g2473 | - | - | gmx:100781603 | 548.125 |