Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2444 ATGTCCAAAGAAGGAAAACTAATGAAGCTCAAGTCAGTGCTCAAGAAATTGAACTCATTTAGCAACAAGCAGCAAAGCCGCGCCACCATCAGCGCCGTCGCGAGGGACGAATCATCGTCGCCATCGGGACCGGAGCTCCTCCCTGTGTACGTGGGCAAAACCCGGCGGCGCTACCTCGTGAATTCCGACGTTGTGGGACACCCACTGTTCCAAGAGCTGGTGGATAGGTCCCGCGATTCTTCCGAGGAGGAGGAGGAGACCGTGAACGTGGCGTGCGAGGTTGTCCTGTTCGAGCACCTTCTCTGGATGCTCCAAAATGCTGATCCTCAACCCGAGTCTCTCAACGAGCTCGTCCACTTCTACGCTTGCTAA 372 0.5565 MSKEGKLMKLKSVLKKLNSFSNKQQSRATISAVARDESSSPSGPELLPVYVGKTRRRYLVNSDVVGHPLFQELVDRSRDSSEEEEETVNVACEVVLFEHLLWMLQNADPQPESLNELVHFYAC* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2444 123 MobiDBLite consensus disorder prediction 21 45 - -
Apr1g2444 123 PANTHER SMALL AUXIN-UP RNA-RELATED 4 123 - -
Apr1g2444 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 123 IPR003676 GO:0009733
Apr1g2444 123 MobiDBLite consensus disorder prediction 21 38 - -
Apr1g2444 123 Pfam Auxin responsive protein 15 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2444 Apr-Chr1 34084788 34085159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2444 5 104 Calmodulin-binding Proteins AT4G34750 30.476 7.86e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2444 - - gmx:100806227 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2444 1 34084788 34085159 Apr1g2444 1 34084788 34085159 ECH