Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2439 ATGCAAACCCAACTCACACTCTCCACTCTCTTCCTTTCACTCTTATTAACATCTCAAACATTTTTCACTCTCGCAGCGCAGAGCAAACCACAGGATCTGGTCCAGTCATCGTGCGTCCACGCCAGGTACCCAAGCCTGTGTCTTCGAACCCTCTCCAACTACCCTGGGCCCGCCAACACCCCGCTGGACCTGGCCCGGGCCTCCCTCAGGGTGAGCCTCGCCCACGCTCGCCGGGCCTCCAAGTACTTAAAGGCATTGTCCAGAGGCGGCACCACCACATTGGGTAAACGGCAGCGAACGGCGTTACGCGACTGCACGGAACAGATTTCGGACTCCGTTGAACAGCTACGGAAGAGCCTCGACGAGTTGCAACATCTACGGTCGGAGACGTTCCGGTGGCAGATGAGCAACGCCCAGACGTGGGTCAGCGCCGCCCTCACCGACGGCGACACGTGTCTCGACGGCTTCGACGGGAATGTCAGGCCCGACCTGAAACGCCGGGTCACGGATGTTGCCAGAGTAACTAGCAATGCTTTGTATATGATTAATAGACTCGATAAAGGTGGGCCCAAGCCCGAGCCCAAGCCTGACTCTGCCTCGAGCATCAAGAACTGA 615 0.5805 MQTQLTLSTLFLSLLLTSQTFFTLAAQSKPQDLVQSSCVHARYPSLCLRTLSNYPGPANTPLDLARASLRVSLAHARRASKYLKALSRGGTTTLGKRQRTALRDCTEQISDSVEQLRKSLDELQHLRSETFRWQMSNAQTWVSAALTDGDTCLDGFDGNVRPDLKRRVTDVARVTSNALYMINRLDKGGPKPEPKPDSASSIKN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2439 204 PANTHER PECTINESTERASE INHIBITOR 3 8 187 - -
Apr1g2439 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 187 - -
Apr1g2439 204 SMART PMEI_2 29 181 IPR006501 GO:0004857
Apr1g2439 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 185 IPR035513 -
Apr1g2439 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 187 IPR035513 -
Apr1g2439 204 Coils Coil 106 126 - -
Apr1g2439 204 MobiDBLite consensus disorder prediction 184 204 - -
Apr1g2439 204 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 185 IPR006501 GO:0004857
Apr1g2439 204 Pfam Plant invertase/pectin methylesterase inhibitor 32 180 IPR006501 GO:0004857
Apr1g2439 204 CDD PMEI-like_3 36 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2439 Apr-Chr1 34011046 34011928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2439 33 185 Carbohydrate Esterase AT3G14310 32.515 2.21e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2439 - - gmx:100816686 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2439 1 34011046 34011928 Apr1g2439 1 34011046 34011928 ECH