Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2429 ATGGCTTTAGCCATTTCGTCGACCGCATTGTCTACTCTTCCAAACAGAGAAATACGTAAAAAGGTTTTCCCCGAAAGCACTGTGACATGTCTGAGGTTGACCAAAAGAACCTTAACAAATGCAACAAAAGGAGTGTCAGATGTGTGTGAGCCACTTCCACCAGATAGGCCATTGTGGTTCCCTGGTAGTTCACCTCCTCAGTGGCTTGATGGCAGTCTTCCTGGTGATTTCGGTTTTGACCCGCTTGGATTAGGGTCTGATCCAGAATTGCTCAAATGGTTTGCTCAGGCAGAGCTAATGCATGCTAGATGGGCAATGCTTGGAGTGTTTGGGATCCTCATACCGGAATTGCTTGAAAAGATGGGTTATATTGAGAAGTTTTCTTGGTATGATGCTGGTGCACAAGAATACTTTACAGACCCCATAACCTTGTTCATTGTACAAATGGGCTTGATGGGCTGGGTTGAGGGTCGAAGATGGGCTGACATGATTAACCCAGGATGTGTTGACATTGAGCCCAAACTGCCACACATTACAAAGCCCAAGCCAGATGTTGGTTACCCTGGTGGGTTGTGGTTTGACCCTTTGATGTGGGGACGAGGATCACCTGAGCCAGTGATGGTGTTGAGAACTAAGGAGATCAAGAATGGTAGACTTGCAATGCTAGCTTTTGTTGGCTTCTGTTTCCAAGCTATTTATACTGGGGAAGGCCCCCTTGAAAATTTGATGGCACACATTGCTGATCCTGGTCATTGCAACATTTTCTCGGCTTTCACATCGCGGTAG 786 0.4644 MALAISSTALSTLPNREIRKKVFPESTVTCLRLTKRTLTNATKGVSDVCEPLPPDRPLWFPGSSPPQWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVFGILIPELLEKMGYIEKFSWYDAGAQEYFTDPITLFIVQMGLMGWVEGRRWADMINPGCVDIEPKLPHITKPKPDVGYPGGLWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAIYTGEGPLENLMAHIADPGHCNIFSAFTSR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2429 261 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Apr1g2429 261 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
Apr1g2429 261 SUPERFAMILY Chlorophyll a-b binding protein 55 260 - -
Apr1g2429 261 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 258 - -
Apr1g2429 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2429 Apr-Chr1 33895967 33898167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2429 54 261 Chloroplast and Mitochondria Gene Families AT3G61470 66.827 2.91e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2429 K08908 - gmx:100812066 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2429 1 33895967 33898167 Apr1g2429 1 33895967 33898167 ECH