Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2416 ATGGGTTCCGTTTCAATCCCCTGTTTCGTTCTCATCGTTCTGTTACAATGCCGTTACCTATTCGCATCACCCAATGTGGCCAAGAAAACATACATAGTTCACATGAAGCACAACAACAAGCCTGAAATATACCCCACACACCTTGACTGGTACACCGCAAATCTCCAATCCATTTCAACGGATTCCGATCCACTCCTCTATTCCTACACCAACGCTTACAACGGCTTTGCTGCGTCGCTCGATGACCAACAGGCGCAGCAACTTCTCAGATCCGAAGCGGTTCTCGGCGTCTACCAGGACACCGTTTACCAACTTCACACCACTCGTACACCGCAGTTCCTTGGCCTTGAAGCCCAAACGGGCCTGTGGGAAGGCCACAGTACCCAGGACCTCAACCAAGCGTCGCACGACGTTATCATAGGGGTGCTCGACACTGGAATATGGCCCGAATCTCAGAGCTTCAACGACGCCGGAATGCCAGACATTCCGCCACGGTGGCGCGGCGAGTGCGAGCCAAGCGCCGATTTCTCGCCTTCCCTTTGCAACAAAAAGCTCATCGGCGCGCGAAGCTTCTCGCGAGGGTTCCACATGGCGGCTGGAACTGGCGCTGGTTACGCCAATAAAGAGCCGGTGTCCCCTCGCGATAGGGACGGCCACGGGACCCACACGGCAAGCACCGCCGCTGGCTCGCACGTGGCGAACGCCAGCCTCCTCGGCTACGCGAGCGGCACTGCACGTGGCATGGCGCCGCAGGCGCGCGTGGCGGCGTATAAGGTTTGTTGGACGGACGGTTGCTTCGCCTCGGACATTCTCGCCGGAATCGACCGCGCAATTGAGGACGGCGTGGACGTGCTCTCGCTTTCCCTCGGCGGTGGTTCCGCTCCTTACTTCCGCGACACCATCGCCGTTGGCGCATTCGCGGCGGTGGAGAGAGGGATCTTCATTTCCTGCTCCGCCGGGAACAGCGGGCCCAGCAAAGCCTCTCTTGCCAACGTGGCACCGTGGATAATGACTGTTGGGGCAGGGACGTTAGACAGAGATTTCCCTGCTTACGCTGTGCTCGGCAACAAGAAGCGCTTCGCTGGGGTTTCGCTTTACAGTGGAAAGGGAATGGGGAGTGAGCCCGTGGGTTTGGTTTATAACAAAGGGTCGAACCAGTCGGGGAGTATTTGCATGCCCGGTTCGCTGGACCCCGCCTTGGTTCGAGGTAAAGTGGTGGTTTGCGACAGAGGGCTGAATGCGCGCGTGGAGAAGGGTAAGGTGGTGCGTGATGCCGGTGGGGTTGGGATGATTCTGGCGAACACTGCAGCGAGTGGTGAAGAGTTGGTGGCGGATAGTCACCTGCTACCGGCTGTGGCGGTGGGGAGAAGGGTGGGGGATCAGATCAGAGAGTATGCTGCCTCGGATCCCAATCCAACGGCAGTTCTTGGATTCCGTGGAACGGTTTTGAACGTTAGACCTTCCCCTGTCGTGGCAGCGTTTAGTTCGAGAGGGCCCAATATGGTGACTAGACAGATTCTGAAACCGGACGTTATTGGGCCTGGGGTTAACATCTTAGCTGGTTGGTCAGAAGCTATTGGGCCCTCTGGGTTGTCTGCTGACACTCGCAAGACACAGTTCAACATTATGTCAGGTACGTCCATGTCTTGTCCACACATTAGTGGTTTGGCTGCGTTGTTGAAAGCCGCTCATCCAGATTGGAGTCCCAGTGCTATTAAATCTGCACTCATGACTACGGCTTATACCCACGACAACACCAAGTCCCCACTTCGTGATGCCGAAGGGGCTGCATTTTCCACTCCTTGGGCTCACGGTGCCGGCCATGTTAACCCTCAGAAGGCCCTCTCTCCTGGCCTTGTCTATGATGCCTCAACCGCCGACTACGTTAAGTTCTTGTGCTCCTTGGACTACAACCCCGACCACATACAACTCATTGTTAAGCGTCCCGGAGTTAACTGTACCACCAAGTTCTCTGATCCTGGCCAATTGAATTACCCATCCTTCTCTGTTTTGTTTGGAGGCAAGAGGGTGGTGCGGTACACGCGCACCTTGACCAACGTCGGGGAGGCCGGGTCTGTTTATGATGTGGCAGTGGAGGGCCCTTCCACGGTGGGGATAACGGTGAAGCCCTCAAGACTTGTGTTTGGGAAAGTGGGGGAAAAGCGACGGTACACGGTGACGTTTGTGTCGAAGAAGGGTGGGGGGGATTCCTTTAGGTATGGATTTGGCAGTATTATGTGGAGCAATGTGCAACACCAAGTTAGGAGCCCAGTTGCTTTTTCTTGGACACAGTTGTGA 2298 0.5601 MGSVSIPCFVLIVLLQCRYLFASPNVAKKTYIVHMKHNNKPEIYPTHLDWYTANLQSISTDSDPLLYSYTNAYNGFAASLDDQQAQQLLRSEAVLGVYQDTVYQLHTTRTPQFLGLEAQTGLWEGHSTQDLNQASHDVIIGVLDTGIWPESQSFNDAGMPDIPPRWRGECEPSADFSPSLCNKKLIGARSFSRGFHMAAGTGAGYANKEPVSPRDRDGHGTHTASTAAGSHVANASLLGYASGTARGMAPQARVAAYKVCWTDGCFASDILAGIDRAIEDGVDVLSLSLGGGSAPYFRDTIAVGAFAAVERGIFISCSAGNSGPSKASLANVAPWIMTVGAGTLDRDFPAYAVLGNKKRFAGVSLYSGKGMGSEPVGLVYNKGSNQSGSICMPGSLDPALVRGKVVVCDRGLNARVEKGKVVRDAGGVGMILANTAASGEELVADSHLLPAVAVGRRVGDQIREYAASDPNPTAVLGFRGTVLNVRPSPVVAAFSSRGPNMVTRQILKPDVIGPGVNILAGWSEAIGPSGLSADTRKTQFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTHDNTKSPLRDAEGAAFSTPWAHGAGHVNPQKALSPGLVYDASTADYVKFLCSLDYNPDHIQLIVKRPGVNCTTKFSDPGQLNYPSFSVLFGGKRVVRYTRTLTNVGEAGSVYDVAVEGPSTVGITVKPSRLVFGKVGEKRRYTVTFVSKKGGGDSFRYGFGSIMWSNVQHQVRSPVAFSWTQL* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2416 765 SUPERFAMILY Protease propeptides/inhibitors 28 104 - -
Apr1g2416 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 762 IPR045051 -
Apr1g2416 765 CDD Peptidases_S8_3 103 581 IPR034197 -
Apr1g2416 765 SUPERFAMILY Subtilisin-like 105 619 IPR036852 GO:0004252|GO:0006508
Apr1g2416 765 Pfam Fibronectin type-III domain 662 759 IPR041469 -
Apr1g2416 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 106 IPR037045 -
Apr1g2416 765 Pfam Subtilase family 136 583 IPR000209 GO:0006508|GO:0008236
Apr1g2416 765 Gene3D - 345 483 - -
Apr1g2416 765 Gene3D - 632 762 - -
Apr1g2416 765 CDD PA_subtilisin_like 351 474 - -
Apr1g2416 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Apr1g2416 765 Pfam PA domain 399 462 IPR003137 -
Apr1g2416 765 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252|GO:0006508
Apr1g2416 765 MobiDBLite consensus disorder prediction 203 226 - -
Apr1g2416 765 Pfam Peptidase inhibitor I9 30 106 IPR010259 -
Apr1g2416 765 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Apr1g2416 765 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Apr1g2416 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Apr1g2416 765 ProSiteProfiles Serine proteases, subtilase domain profile. 119 615 - -
Apr1g2416 765 PANTHER CUCUMISIN-RELATED 20 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2416 Apr-Chr1 33790039 33792457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2416 27 765 Subtilisin-like Serine Gene Family AT2G05920 70.135 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2416 - - gmx:100797543 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2416 1 33790039 33792457 Apr1g2416 1 33790039 33792457 ECH
Apr9g2457 9 31940370 31943891 Apr1g2416 1 33790039 33792457 PCT