Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2391 ATGCTTACATGCATAGCACGTCCCAAGACCCAGTCCGAAGCCAAAGGGCAAGGCGTGAAGTCCCTCACCGGCCAGATAAAAGACATGGCGTTGAAGGCGTCAGGGGCCTACAAGCACTGTGCTCCGTGCGCCACGCAGAGTCAACTCAAGAGTGACGCGGCCGAGTCCGACTCGGACTCGGAGCGGTGGCGACGGAGGTGGGGGAAGCAAATGGAGGCCAGGCTCAAGGGGATATCCAGTGGGGAGGGCACGCCGAGTTCAAGCGGAAGGAGGCTTGTTGTGGTGTTGGAAGAGGAGGAGCAGCCCAAGGAGTGGGTGGCGCAGGTCGAACCTGGCGTTTTGATCACCTTCGTGTCGCTTCCGCGTGGCGGTAACCATCTCAAGCGGATACGATTCAGTCGTGATATATTTAACAAGTGGCAAGCTCAAAGATGGTGGGCAGAGAATTATGACAAGGTCATGGAACTTTACAACGTTCAAAGGCTTAACCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGTTCAAAGCGTGAATCAATAGAAGAAATCCCTTTGACACCTCCAATGACAAGGGAAAGGCCACCTTGTAATTTATACCGTCCAACAGGGATGGGAATGGGGTACTCATCCTCAGATTCCCTTGATCATCAATCAATGCATTCCAAGCATTACTATGATCCCAATGGTGTGAACTCAACCCCAAAGGTATCCACCATTAGTGCTGCCAAGACAGAAATATCTTCAATGGATGCTTCTATAAGGAGTAGCTCATCTAGAGAAGCTGATCACTCTGAGGATCTATCGGTCAGCAATGCCAGTGACTTGGACACTGAATGGGTTGAACAGGATGAACCTGGGGTTTATATTACCATCAGAGCTCTGCCAGGTGGCAAGAAAGAGCTCAGAAGAGTCAGGTTCAGTCGAGAAATGTTTGGAGAGATGCATGCTAGACTGTGGTGGGAAGAGAACCGCGCTAGAATACATGAACAATACTTGTGA 1014 0.5089 MLTCIARPKTQSEAKGQGVKSLTGQIKDMALKASGAYKHCAPCATQSQLKSDAAESDSDSERWRRRWGKQMEARLKGISSGEGTPSSSGRRLVVVLEEEEQPKEWVAQVEPGVLITFVSLPRGGNHLKRIRFSRDIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKRESIEEIPLTPPMTRERPPCNLYRPTGMGMGYSSSDSLDHQSMHSKHYYDPNGVNSTPKVSTISAAKTEISSMDASIRSSSSREADHSEDLSVSNASDLDTEWVEQDEPGVYITIRALPGGKKELRRVRFSREMFGEMHARLWWEENRARIHEQYL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2391 337 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 337 - -
Apr1g2391 337 ProSiteProfiles BRX domain profile. 103 158 IPR013591 -
Apr1g2391 337 MobiDBLite consensus disorder prediction 1 20 - -
Apr1g2391 337 MobiDBLite consensus disorder prediction 216 235 - -
Apr1g2391 337 ProSiteProfiles BRX domain profile. 282 337 IPR013591 -
Apr1g2391 337 Pfam Transcription factor BRX N-terminal domain 12 43 IPR027988 -
Apr1g2391 337 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 337 IPR044532 -
Apr1g2391 337 MobiDBLite consensus disorder prediction 254 276 - -
Apr1g2391 337 Pfam Transcription factor regulating root and shoot growth via Pin3 103 157 IPR013591 -
Apr1g2391 337 Pfam Transcription factor regulating root and shoot growth via Pin3 282 336 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2391 Apr-Chr1 33560344 33566419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2391 1 337 Major Intrinsic Protein MIP AT1G31880 44.000 1.04e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2391 - - gmx:100791360 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2391 1 33560344 33566419 Apr1g2391 1 33560344 33566419 ECH
Apr9g2482 9 32116743 32121424 Apr1g2391 1 33560344 33566419 PCT