Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2357 ATGAGGGTGATTTTAGCACTGCTTCCGCAGCTAGTGAATCTTTGCATCATTGGCTTTGTTGTGACACTCCAAGGATCCGAAGGGTTTGTTATATCCCCATCTCCAGCAAACTTACCTGTGAATTCTTCCCCAAGTAAAGCACCTAGTCTTTTACACTCAAGAGAACCATGGAGAACCATTGCACCAAGCTTTCCAGAAGTACCAAATGGGTCATTCTTGCACCCTCCAGTTACATTACAACCTGCTGCATCAGCTCCAACTCCTAAGAAGGTGAAAGGATTTGATCCATCTGTATCTCCCAGTCCTAGTACAAGCACCATAACATCATCACCACCGTATAAGGCTGCTCCTGCACCGTCAACTGATAAAGGGAATGTGACACCATCCATACAATCAAGTCCACCTCAAAGGATAACACCTGATGTTAGGCCTCCTATACCCACACCATCTGCTCCAGCTCCTGTTGTAATACCCTCTAGCAATCTGCCAAGAACTTCACCAATCAGCCAACCAATTGAAAATGGAAGTTTGCCTCCTAAGGTTGATAAGAGGAATGAAAGTAATAGTCATGAGAAAGAGCCAATATCACGAGCCCCAGTTGAACTACCTTCTACCAAATTGCCCAAAATTTCACCAGCAATTCAACCAACTGAAAATGGAAGTTTGCCTCACAGAGAGGGTGCAAATAAAGGTCACACCCCAGAGCTGCTTTCACCAGCCCCTGTCATATTCAATTTGCCCAAACATTCACCAGTGAGTCAGCCAACTGATCATGGAAGTTTGCCTCTAACTGTTCATAGAAGGAGGAATAACAACACAGGTCACTCATTGGAGCCAGTTTCACAAGAAAAAAATTATGCAGCACCAGTCACATCACCGAGTAGTTCACTTCCCATAGAACCACCATTGGTCCATCCAGTCATATCAGCAGCGTCTCCTTCCAAATTACCAGCACCTGTTCTCTCTCCCGCATTAACACCTTCCGGAAGCTTGAGTTGGAAAAATGGTGGAGAACCAGTTTCTGCACCTCTTTACAAAGCACCAAAGCCACTACCGGTTATAGTACATTCCCCTGCTCAAGCACCTGTTGTCTCTCCTGCATTGACACCTTCCAGAAGCTTCAGCTGGAAGAAAGGTGGAGAACCAGTTTCTGCACCTCTGTACAAAACACCAAAGCCACTACCTGCTGTAGTACATTCCCCTGCTCAAGCTCCTGCTGCACATAAAGCGAGGCAATTTCAGCCTGTTCCTGAGCCACTGATTTCATCTCCTAAATCTCCTTTTAACAAAGAAGATCATTCTCCCACGTCTTCACATTCAACTACAGTTTATAAGCACCACCATGCAAGGAAAACAATCCCCAGCCTTGCTCCTGCATCAACATATTTGGTTTCTCCTCCCACTTCGAAACTCGGAGATCAACCATTTCCTCCCACATTGCAACCAAGTAGACAAAGACCTCATACTCCACCACCAATGAACACAGGTCCCGCAGTCTCACCATTCAGTTTCCCAATTCAGTCACCAGTGAGCCAGGTTTATCCTGCTCCTTCTCCAACCAAAATTCCGTTTCATCCTCCTAAAGTATCTCCTCCTAGAGTATCTCCTTCTCGGCCTTCATTTAAGAGACCTAAGAAGCCAGTCTTGCCTCATGTTCCAGCACTGCCACCCCCACCTCCCAATGAAGATTGTTTGTCAACGGTTTGCTCAGAGCCCTATACAAATTCTCCACCTGGAGCACCTTGCAGATGTGTCTGGCCCATGAAAGTTGGTCTTCGCCTTAGTGTTTCTCTGTATACCTTCTTCCCTTCGGTTTCAGAGCTTGCTTCTGAAATTGCCACTGGGGTTTTCATGAGGCAAAGTCAAGTTCGCATTATGGGAGCCAATGCGGCAGGCCAGGAACAAGATAAAACTGATGTCCTCATTGATTTGGTACCTCTTGGGGAAGAATTTGATAACACTACAGCCTTTTTAACTTCTGAAAGATTTTGGCACAAACAGGTTGTTATAAAGACTTCAGACTTTGGTGAATATGATGTGTTATATGTGAGCTATCCAGGTTTACCTCCATCTCCTCCATTACCACCTTCAAGCATTAGCATTATAGATGGTGGTCCATATTCAAGTGGTGGCAGTAATGGTAGGACAATAAAGCCACTTGGGGTTGACATACCAAAGAGGCAGCATAAAGGTGGACTTAGCAAGGGAATAATAGCTATTATTGCTCTTTCAGTTTTTCTAGCATTTGTTTTATGTGTTGCTGCTGTTTGGGCCTTGCTCAAGTGCAGAGATCATACGAGTCAACCAACATCAACCCCACGGGTTTTGCCACCCTCCCTTGCTAAAACACCAGGTGCTACTGGGTCATTAGGTGGAGGTGTGCTTGCTTCAACTTCATCATCATTTCGATCTAGCATTGCTGCTTATGCAGGATCTGCCAAGACTTTTAGCATGAATGACATTGAGAAAGCCACCGATAAGTTCCATGCTTCTCGAGTACTTGGAGAAGGTGGTTTTGGACGTGTTTATAGTGGTATCCTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTAAAAAGAGAGGATCATCACGGTGATCGTGAATTCTTGTCTGAAGTTGAGATGCTTAGCCGCCTTCACCACAGAAATTTGGTTAAGTTGATTGGTATATGCACAGAGGTCAGCTTCCGCTGTCTGGTTTATGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAAGGAAAAGAGCCCACTTGATTGGAGTGCTCGGATAAAGATAGCTCTTGGTGCTGCTCGTGGACTGGCTTATTTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGACTTCAAGTCTAGCAATATCTTGCTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCCCGAACAGCAGCTGATGAGAGAAGCAGACACATATCAACACGTGTTATGGGAACTTTCGGTTATGTGGCTCCGGAGTATGCAATGACTGGGCATCTTCTTGTGAAAAGTGATGTTTACAGCTATGGAGTTGTTATTCTTGAGCTTTTGACAGGAAGAAAACCTGTAGATATGACACAACCTCCTGGTCAAGAGAACCTTGTTGCATGGGCTCGTCCACTCCTCTCAAGCAAAGAAGGATTGGAAGCAATAATAGATCCATCTCTAGCAACTGATGTGCCTGTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCGGAGGTGTCAGACCGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTAAAACTTGTATGCAATGAATGTGATGAAGCAAGAGAAGCGGGTTCAAGTTCTAGCCAGGATGATTTATCTGTTGATTTGAACAATTCTAGACAACTATCAGATAATTTCCAAGGCCAATTCTCAGCGACTAACTATGATTCGGGAGTTGATATTGAAAATGGGTTGTCAGCATCAGAGTTATTCAGCTCATCAGCAAGATTTGGAAGGCAAGTATCAGGATCATTCAGAAGAAGACATTCTTATTCAGGTCCACTGAAAACTGGAAGAAGCAAGCGGTTGTGGCAGATAATTAGAAGGCTTTCTGGTGGTAGTGTCAGTGAACATAGAATTATGTTCAAGTCATGA 3648 0.4452 MRVILALLPQLVNLCIIGFVVTLQGSEGFVISPSPANLPVNSSPSKAPSLLHSREPWRTIAPSFPEVPNGSFLHPPVTLQPAASAPTPKKVKGFDPSVSPSPSTSTITSSPPYKAAPAPSTDKGNVTPSIQSSPPQRITPDVRPPIPTPSAPAPVVIPSSNLPRTSPISQPIENGSLPPKVDKRNESNSHEKEPISRAPVELPSTKLPKISPAIQPTENGSLPHREGANKGHTPELLSPAPVIFNLPKHSPVSQPTDHGSLPLTVHRRRNNNTGHSLEPVSQEKNYAAPVTSPSSSLPIEPPLVHPVISAASPSKLPAPVLSPALTPSGSLSWKNGGEPVSAPLYKAPKPLPVIVHSPAQAPVVSPALTPSRSFSWKKGGEPVSAPLYKTPKPLPAVVHSPAQAPAAHKARQFQPVPEPLISSPKSPFNKEDHSPTSSHSTTVYKHHHARKTIPSLAPASTYLVSPPTSKLGDQPFPPTLQPSRQRPHTPPPMNTGPAVSPFSFPIQSPVSQVYPAPSPTKIPFHPPKVSPPRVSPSRPSFKRPKKPVLPHVPALPPPPPNEDCLSTVCSEPYTNSPPGAPCRCVWPMKVGLRLSVSLYTFFPSVSELASEIATGVFMRQSQVRIMGANAAGQEQDKTDVLIDLVPLGEEFDNTTAFLTSERFWHKQVVIKTSDFGEYDVLYVSYPGLPPSPPLPPSSISIIDGGPYSSGGSNGRTIKPLGVDIPKRQHKGGLSKGIIAIIALSVFLAFVLCVAAVWALLKCRDHTSQPTSTPRVLPPSLAKTPGATGSLGGGVLASTSSSFRSSIAAYAGSAKTFSMNDIEKATDKFHASRVLGEGGFGRVYSGILEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGVDKEKSPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADERSRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLTGRKPVDMTQPPGQENLVAWARPLLSSKEGLEAIIDPSLATDVPVDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAREAGSSSSQDDLSVDLNNSRQLSDNFQGQFSATNYDSGVDIENGLSASELFSSSARFGRQVSGSFRRRHSYSGPLKTGRSKRLWQIIRRLSGGSVSEHRIMFKS* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2357 1215 MobiDBLite consensus disorder prediction 519 538 - -
Apr1g2357 1215 SUPERFAMILY Protein kinase-like (PK-like) 809 1101 IPR011009 -
Apr1g2357 1215 MobiDBLite consensus disorder prediction 517 555 - -
Apr1g2357 1215 MobiDBLite consensus disorder prediction 71 238 - -
Apr1g2357 1215 Gene3D Transferase(Phosphotransferase) domain 1 904 1128 - -
Apr1g2357 1215 PANTHER OS01G0750732 PROTEIN 381 1214 - -
Apr1g2357 1215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 950 962 IPR008271 GO:0004672|GO:0006468
Apr1g2357 1215 MobiDBLite consensus disorder prediction 122 137 - -
Apr1g2357 1215 MobiDBLite consensus disorder prediction 179 197 - -
Apr1g2357 1215 MobiDBLite consensus disorder prediction 396 500 - -
Apr1g2357 1215 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 381 1214 - -
Apr1g2357 1215 MobiDBLite consensus disorder prediction 480 498 - -
Apr1g2357 1215 ProSiteProfiles Protein kinase domain profile. 828 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2357 1215 MobiDBLite consensus disorder prediction 159 173 - -
Apr1g2357 1215 MobiDBLite consensus disorder prediction 458 479 - -
Apr1g2357 1215 MobiDBLite consensus disorder prediction 427 442 - -
Apr1g2357 1215 MobiDBLite consensus disorder prediction 138 156 - -
Apr1g2357 1215 Pfam Protein tyrosine and serine/threonine kinase 830 1101 IPR001245 GO:0004672|GO:0006468
Apr1g2357 1215 MobiDBLite consensus disorder prediction 97 115 - -
Apr1g2357 1215 ProSitePatterns Protein kinases ATP-binding region signature. 834 856 IPR017441 GO:0005524
Apr1g2357 1215 CDD STKc_IRAK 834 1102 - -
Apr1g2357 1215 Gene3D Phosphorylase Kinase; domain 1 800 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2357 Apr-Chr1 33235202 33246089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2357 269 1215 Receptor kinase-like Gene Family AT5G56890 54.162 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Apr1g2357 PK_Tyr_Ser-Thr 6.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2357 - - gmx:100802309 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2357 1 33235202 33246089 Apr1g2357 1 33235202 33246089 ECH