Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2300 ATGGAGGGTCAACCAGCTAAACGTAGACGTGTTTACTCACTTGAACCCAACAAAGTGGTACAAGCAGCGTTTGCTAGAAACTACATGAACTATTTGGTTCCAGCTTTGATCAAGATTAAAGATAGGACTACTTCTTCGGAACATAGAAGCCATTGTGATATTCACAATGTTGTTAAGTATGAAGTGGACATGGCAATGGTGTTCTCAGCCCAAGGTTTTGCATGGAGCAATGCTCTAAGTGTCAAGCTTCAAAGGGATAGAGTCAAAGTAGATAGTGACACTACTAGCTTTGATGAAAAAAATAAGACTGGTGAAGATTCATCAAGGATTTGTGACCAAAATGAAATGGTTGCACTGGATTATTTCTCTTCAACCCCTAGTTTGAAGAATTCTAAGTACAAGGACATTCCAGAAATGAAAAAGGGTTTGAGAGGAGAAGTTGATGACGATGACGAGATCATCAGTGGCCAGTTGAGGAGCCTAAGAAGGTTGATACCCGGTGGAGAGGAAATGTGTAATGAACAAATGGTGGCAGAACTGGAGAGCTATATAAGTTGTTTGCAAATGCAGGTGAACATTCTTCAATGCCTCGCCGAGACACGTTGA 606 0.4109 MEGQPAKRRRVYSLEPNKVVQAAFARNYMNYLVPALIKIKDRTTSSEHRSHCDIHNVVKYEVDMAMVFSAQGFAWSNALSVKLQRDRVKVDSDTTSFDEKNKTGEDSSRICDQNEMVALDYFSSTPSLKNSKYKDIPEMKKGLRGEVDDDDEIISGQLRSLRRLIPGGEEMCNEQMVAELESYISCLQMQVNILQCLAETR* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2300 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 200 IPR044660 GO:0006355
Apr1g2300 201 CDD bHLH_AtIBH1_like 143 198 IPR044549 GO:0006355
Apr1g2300 201 PANTHER TRANSCRIPTION FACTOR BHLH146 3 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2300 Apr-Chr1 32533962 32534567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2300 7 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 31.088 2.39e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2300 - - aprc:113852314 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2575 9 32959755 32960378 Apr1g2300 1 32533962 32534567 PCT