Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2276 ATGTTACTACTAAATATGTTTTTACAAAACCATCACAAATCCTTTTCTCTTCTTTGGCTTCAATTACTCCTAATCTTTCTAACCAGTGCCTCAGTTAATGGAATTGAGCAAAAGAACTTCTACATTGTTTTCTTGGGAACTCATCCTGTGAGCAGAGACATTGCACTTGATAACCATTTAAAAGTTCTATCAGCAGTGAAGGGAAGCTACCTTGAAGCCAAACAATCCATGGTATATAGTTACACAAAAAGCTTTAATGCATTTGCTGCAAAACTGTCTGAGGACGAAGCCAAGAATTTGTCAGACATGGATGAAGTTCTCTCGGTGTTTCAAAATCAGTACCGCAAGCTACACACAACAAGATCATGGAACTTCATTGGGTTACCTCAAACTGCTAAGAGAAGATTGAAATTAGAGAGTGACATAATTGTTGCTCTTTTGGATACAGGGATCACCCCGGAATCTAAAAGCTTCAAGGACAAAGGGTTTGGTCCTCCACCAGCAAGATGGAAAGGAACTTGTGGCCACTATGCTAATTTCTCAGGCTGCAATAACAAAATCATAGGAGCCAAATACTTCAAAGCTGATGGAGACCCTGATCCATTTGACATATTATCTCCTATAGATGTTGATGGACATGGCACTCACACTGCATCAACAGCTGCAGGCAATTTAGTCTCAAATGCAAGCCTCTTTGGATTGGCCAATGGCACTGCTCGCGGAGCCGTGCCATCGGCTAGATTGGCAATATACAAAGTTTGTTGGTCATCCAGTGGATGTGCAGATATGGACATACTAGCTGCATTTGATGCTGCTATCCATGATGGTGTGAATGTCATATCCATTTCCATAGGTGGAGGGAATCCTAGTATTGTGGAGGATTCTATATCAATTGGTGCATTTCATGCCATGAGGAAAGGTATAATCACAGTGGCCTCAGCAGGAAATGATGGTCCTACTTTGGGAACTGTCACAAATACTGCACCATGGATTGTAACAGTAGCGGCTAGTGGCATTGATAGGACTTTCAGAAGCACTGTACAGTTGGGAAATGGAAAGAATATTTCTGGGGTAGGAGTTAGCTGTTTCAATCCAAAACAAAAACAGTACCCTCTTGTCAATGGGATTGATGCAGCCAAAGACCCAAAAGATAAGGAAGATGCTAGATTCTGCTATGAAGGCACCTTAGAGCCTAATAAGGTTAAGGGAAAGCTTGTTTACTGCGAATTAGGAACATGGGGCACTGAAGCTGTTGTAAAGGGAATTGGAGGCATCGGTTCTTTAATAGAAAGTGAACAATATCCTGATGTTGCTCAAATTTTCATGGCTCCTGCTACCATTGTGAATAATGACACAAGTGAAATTATTACCAAATATTTACAATCCACAAGATCACCATCAGCGGTTATATACAAAAGCCAGGAAGTACAAAAGCAAGCTCCATTCATTGCTACATTCTCATCTAGAGGTCCGAATCCTGGATCCCGCAATGTTCTCAAGCCTGATGTTGCAGCTCCTGGCATTGACATCTTGGCATCTTATACTCTTATGAAGTCACTCACAGGTTTGAAAGGTGACACTCAATTTTCAGAATTTATTCTATTGTCTGGAACCTCTATGTCATGTCCACATGTTGCTGGAGTAGCAGCATATGTGAAGTCTTTTCACCCAGATTGGACTCCTGCTGCCATCAGATCTGCTATTATTACTACAGCCAAACCTATGAGCAAGAGAGTTAACAATGAAGCAGAATTTGCCTATGGTTCTGGTCAATTGAACCCAACAAGAGCTGTGAGCCCTGGTTTGGTGTATGACATGGATGACTTAGCTTATATTCAATTTTTATGCCATGAGGGTTACAATGGTTCTAGTTTTTCAGCATTAGTTGGTTCTCCTGTAAATTGCTCCTCTTTGATTCCTGGGATTGGCCATGATGCTATCAACTACCCTACCATCCAATTCAGCTTGGAAAGCAACAAAGACACAAGAATAGGAGTTTTCAGAAGAAGAGTGACCAATGTAGGTCCTGCTCCCACCATCTTCAATGCCACCATTAGATCACCAAAAGGAGTGGAAATCACAGTGAAGCCTACTACACTCATTTTCTCTAAAACCTTGCAAAAGAAGAGCTTCAAAGTAGTTGTGAAAGCCACTTCTATTGCAAGTAAGAAAATTGTATCAGGTTCCCTTATATGGAGAAGCCCACGTTACATTGTAAGGAGCCCTATTGTTATCTACCGTCCATAA 2247 0.4121 MLLLNMFLQNHHKSFSLLWLQLLLIFLTSASVNGIEQKNFYIVFLGTHPVSRDIALDNHLKVLSAVKGSYLEAKQSMVYSYTKSFNAFAAKLSEDEAKNLSDMDEVLSVFQNQYRKLHTTRSWNFIGLPQTAKRRLKLESDIIVALLDTGITPESKSFKDKGFGPPPARWKGTCGHYANFSGCNNKIIGAKYFKADGDPDPFDILSPIDVDGHGTHTASTAAGNLVSNASLFGLANGTARGAVPSARLAIYKVCWSSSGCADMDILAAFDAAIHDGVNVISISIGGGNPSIVEDSISIGAFHAMRKGIITVASAGNDGPTLGTVTNTAPWIVTVAASGIDRTFRSTVQLGNGKNISGVGVSCFNPKQKQYPLVNGIDAAKDPKDKEDARFCYEGTLEPNKVKGKLVYCELGTWGTEAVVKGIGGIGSLIESEQYPDVAQIFMAPATIVNNDTSEIITKYLQSTRSPSAVIYKSQEVQKQAPFIATFSSRGPNPGSRNVLKPDVAAPGIDILASYTLMKSLTGLKGDTQFSEFILLSGTSMSCPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSKRVNNEAEFAYGSGQLNPTRAVSPGLVYDMDDLAYIQFLCHEGYNGSSFSALVGSPVNCSSLIPGIGHDAINYPTIQFSLESNKDTRIGVFRRRVTNVGPAPTIFNATIRSPKGVEITVKPTTLIFSKTLQKKSFKVVVKATSIASKKIVSGSLIWRSPRYIVRSPIVIYRP* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2276 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 118 IPR037045 -
Apr1g2276 748 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Apr1g2276 748 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Apr1g2276 748 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Apr1g2276 748 Pfam Subtilase family 140 590 IPR000209 GO:0006508|GO:0008236
Apr1g2276 748 SUPERFAMILY Subtilisin-like 117 602 IPR036852 GO:0004252|GO:0006508
Apr1g2276 748 ProSiteProfiles Serine proteases, subtilase domain profile. 122 598 - -
Apr1g2276 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 746 IPR045051 -
Apr1g2276 748 CDD PA_subtilisin_like 346 470 - -
Apr1g2276 748 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 40 746 - -
Apr1g2276 748 Pfam Fibronectin type-III domain 647 745 IPR041469 -
Apr1g2276 748 Gene3D - 615 747 - -
Apr1g2276 748 Gene3D Peptidase S8/S53 domain 141 608 IPR036852 GO:0004252|GO:0006508
Apr1g2276 748 Gene3D - 340 476 - -
Apr1g2276 748 Pfam Peptidase inhibitor I9 57 118 IPR010259 -
Apr1g2276 748 CDD Peptidases_S8_3 116 572 IPR034197 -
Apr1g2276 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2276 Apr-Chr1 32316071 32322590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2276 30 586 Subtilisin-like Serine Gene Family AT4G00230 64.991 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2276 - - gmx:100795950 1280