Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2255 ATGAATCTAAACCCTAATCACAATGGTGGCGGTGGTGGAGGTGGCGGTGGCGGTAGCCCTTGTGGTGCTTGCAAATTCTTGAGGAGAAAGTGTGTGGCAACCTGTGTCTTTGCTCCTTACTTTGATGCAGAGCAAGGTTCAACTCACTTTGCAGCTGTGCACAAGGTGTTTGGGGCTAGTAATGTAGCCAAGCTTCTCGCTGGCACTCCAGTGCATAGGAGGCTTGATACAGTCATCACCGTTTGCTATGAAGCACAATCACGCCTGAAAGATCCTATTTATGGTTGTGTTTCTCAAATCTTTGCCCTTCAGCAACAGGTGGTGAATTTACAAGCAGAAATCGCTTACTTACAAGGCCAATTTGCTCAGTTGGAGATTCCTCATCAACCAGCACCTCCTCCACCACCACATGGAGTGGTGGCACCGCCGGCTTTCGCTGTCGCCGATCCACCAGCTGCCCCCGCCGCGGCAATGCCGGCAGCTTATGATTTACCTCCAGCTGTTGATCCAATGGTTCACCCTAATGCATGGGCCATGCAACAAAGGGCCATTGACCCACGTCAATATGTGGCTAATGCTCCATCAACCTCTGCTCCTGGTGGTCATCAGGCTATGGGACGTGGGGTTCTGCGTAGACATGGGTCAACTTCTGCACATCCTGCGTCAAGCTCCAATGCTCCATAG 684 0.5161 MNLNPNHNGGGGGGGGGGSPCGACKFLRRKCVATCVFAPYFDAEQGSTHFAAVHKVFGASNVAKLLAGTPVHRRLDTVITVCYEAQSRLKDPIYGCVSQIFALQQQVVNLQAEIAYLQGQFAQLEIPHQPAPPPPPHGVVAPPAFAVADPPAAPAAAMPAAYDLPPAVDPMVHPNAWAMQQRAIDPRQYVANAPSTSAPGGHQAMGRGVLRRHGSTSAHPASSSNAP* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2255 227 ProSiteProfiles LOB domain profile. 19 121 IPR004883 -
Apr1g2255 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 8 195 - -
Apr1g2255 227 MobiDBLite consensus disorder prediction 190 227 - -
Apr1g2255 227 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 195 - -
Apr1g2255 227 Pfam Lateral organ boundaries (LOB) domain 20 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2255 Apr-Chr1 32050464 32053355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2255 23 215 AS2 family AT2G45420 55.769 1.12e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr1g2255 LOB 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2255 K21994 - gmx:100790517 239.58