Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g2242 | ATGGGCAATTGCGGTACCAGAGAGGAATCAGCAGTAGTTTCCAATGCTCAAGTTCAGCAGCTTCACCATGCGACGTCGTTGAGCGCAAGTGCCAGGAGTCAAAATGCCGGTGGCGTCGGTGAGAAGAAGCACGGTCACAGGCACAATCTGAGCGAGTGCGCTTCGGATCTGAGCGAGTCTTGTTCGACACCGCGCGGTAACAATAGCAGTAGCAGCAACAACACGCTGCTTTATACGCACGTGATCGCGTTCACGCTTTATGAGTTGGAGACCATAACCAAGAGTTTTCGTGGGGACTATATATTAGGCGAAGGAGGGTTCGGCACTGTTTACAAAGGGTACATTGATGAGAACGTTAGGGTGGGACTGAAGTCACTCCCTGTTGCGGTTAAGGTCTTGAACAAGGAAGGGTTACAGGGACATCGAGAGTGGCTTACGGAGGTGAATTTTCTAGGGCAGCTAAGGCATCCTAATCTTGTGAAGTTGATTGGTTATTGCTGTGAGGATGATCATAGGCTGCTTGTCTATGAGTTCATGTTTCGAGGAAGTCTAGAAAATCACCTGTTCCGAAAGGCAACTGTTCCTTTATCATGGGCGACAAGAATGATGATTGCTCTTGGAGCAGCCAAAGGACTTGCCTTTCTCCACAATGCTGAAAGGCCAGTAATCTATCGTGACTTCAAAACATCTAATATATTATTGGACTCTGACTATACTGCCAAGCTTTCTGATTTTGGGCTGGCTAAAGCAGGACCACAAGGTGATGAAACCCATGTATCCACTCGAGTCATGGGTACATATGGTTATGCTGCCCCTGAATACGTGATGACTGGCCACCTGACGGCTAGGAGTGATGTCTATAGCTTTGGTGTTGTTCTTTTGGAGCTTTTAACGGGAAGGAAATCTGTTGACAAGACCAGACCTGGAAAGGAACAGAGCTTGGTAGATTGGGCACGGCCAAAGCTCAATGACAAGAGAAAGCTCCTACAAATAATTGACCCTAGATTGGAGAATCAATACTCGGTGAGGGCGGCACAAAAAGCATGTAGCTTGGCTTATTACTGCTTGAGTCAAAATCCCAAGGCAAGGCCACTAATGAGTGATGTAGTTGAGACATTGGAACCCTTACAAAGTTCTAGTGTTGGTGCTGGTGAAGTCTCGTTATCTGGATCAAATAGTGGGAGTGCTGGGCCTTTTGCTATGAACAAAATCTCTGACTACCGGATGCGTCACAAGTTTTCAAACAATGTTGGTCCAGGTGCTACTTGTCGATCTCCAAACCCAAATTGTTCACCAGGTGCCCCAGCAGCTTTAAGGGTCAGATGA | 1326 | 0.4713 | MGNCGTREESAVVSNAQVQQLHHATSLSASARSQNAGGVGEKKHGHRHNLSECASDLSESCSTPRGNNSSSSNNTLLYTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGAGEVSLSGSNSGSAGPFAMNKISDYRMRHKFSNNVGPGATCRSPNPNCSPGAPAALRVR* | 442 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g2242 | 441 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED | 39 | 428 | - | - | |
Apr1g2242 | 441 | MobiDBLite | consensus disorder prediction | 23 | 49 | - | - | |
Apr1g2242 | 441 | CDD | STKc_IRAK | 102 | 376 | - | - | |
Apr1g2242 | 441 | PANTHER | OS01G0588500 PROTEIN-RELATED | 39 | 428 | - | - | |
Apr1g2242 | 441 | Gene3D | Transferase(Phosphotransferase) domain 1 | 179 | 386 | - | - | |
Apr1g2242 | 441 | ProSiteProfiles | Protein kinase domain profile. | 96 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g2242 | 441 | Pfam | Protein tyrosine and serine/threonine kinase | 101 | 373 | IPR001245 | GO:0004672|GO:0006468 | |
Apr1g2242 | 441 | MobiDBLite | consensus disorder prediction | 418 | 441 | - | - | |
Apr1g2242 | 441 | ProSitePatterns | Protein kinases ATP-binding region signature. | 102 | 131 | IPR017441 | GO:0005524 | |
Apr1g2242 | 441 | SUPERFAMILY | Protein kinase-like (PK-like) | 69 | 374 | IPR011009 | - | |
Apr1g2242 | 441 | Gene3D | Phosphorylase Kinase; domain 1 | 57 | 178 | - | - | |
Apr1g2242 | 441 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 222 | 234 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g2242 | Apr-Chr1 | 31875354 | 31879166 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g2242 | 84 | 386 | Glycoside Hydrolase | AT3G07070 | 53.595 | 4.23e-108 | 324 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Apr1g2242 | PK_Tyr_Ser-Thr | 6.2e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g2242 | - | - | gmx:102662348 | 845.884 |