Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2241 ATGGCAGTGTGTTTAGTGGGTGGGGCTAAAAGGTTCGAACTCTCCTTCCATATTCGAGAATATTCAAAAGGAAGAGAAGGTGAAGGAGAAGAGTGGAAAGATAAAGACATGGACTGTAATGTCAGCGTCGTTTCCTCAGTACGTGGCAAAAGCAATAACGGAGCCGTTGTTGGATCCTTCCGACGTGAAATTGAGGAAGGAGGGGTTGACAGTGAAACACCCGATGATTTTTGTGCCTGGAATCGTCACCGGTTGGTTGGAACTTTAGGAGGATCGTCAGTTTGTCGATGGATTGTTCAGGAAGAGGTGAGACCCATGAACTCCACCATGCCTTCCAAACCTTTGGATCTTCTTTTCTTCATCCTCGTTATCTCTTTCAATTTCCCAATCACAGAATCACAGGAAGCTCCTTTTGTTTTTCAATTTTGCCCAGAAATTTTATACACAGTGAACAGCACCTATCAATCAAACCTCATGACCCTCCTTTCATCCCTATCCTCCAATGCCGCCACGACAACCTTCTACAACACCACAGTTAAAACTCCATCCGAAACAATTTACGGTCTCTTCATGTGCCGAGGAGACGTACCCGTTAACCTCTGCAAACAATGCATCTTAAACGCAACCCACAGGCTCTCATCCTCAGACTCACAATGCTACCTCTCCAAGCAGGCCATAATCTGGTACGACGAGTGCATGGTTCGCTACTCCAGCACCTCTTTCTTCTCCGATCCCCAAACAGTTCCCGAATTTTACTCATGGAACATGGCCAAAATCTCTAACACCAGTAATTTCATGAATTTGTTGGTGGACACAATGAAACAAACTTCAAATTGCGCAGCGAGTTCTCCACTTGGGAACAGATACGCCACAAACGAAGCAAACATTTCCGAAATTCAAACCCTATATTGTCTCGCTCAATGCACGCAAGATCTCTCACCCCAAGATTGCTCAAATTGTCTCGCAAAAGCAACATCTTTACTTAGATTTTGCTGCGAAGATAAACAAGGAGGAAGGGTTCTGTTTCCTAGTTGCAACATTAGGTATGAATTATATCCTTTCTATCGTGTTACTTCAAAACAATTAGGACCCGTTCCAGAAACTAAATATTCACAAAACGATTCGGCTTGTTCTCAAGTTCCTGCGTATATTTCCCATAACTGTTCAACCAATGAAAACGACATGGCGTTTAAACCAAACCGAAGCACACTCCTTTACTACATGTCCCGCAACGCTACTAACGCCACTGAGTTTCAAACCAAAGTGGGAACGATGAACGGTCTCTTCATGTGCCGCGGCGACATGACTCGTAGTTTATGCAAACAGTGTGTTGAAAACGCAATCGATAAAGTGAGCGTGGTGTGTGATTTGTCAAGCGAGGCTATAGTTTGGTACAATGATTGCTTGGTTCGGTACTCGAATCGGTCGTTTTTGTCGAGAGTGGAAACGAGTCCAAGGGTTGTGAAGTTGAATGTGACGAATCCAGAGGCAATTAACAGCTACTCGTTTGCGTTTACGTTGTCAACTAAGTTGGCAGATATGGCGAATGAAACAGGGGATAGCATTGACAGGTACAAAACGGGAACGTTGAAATTGAATGAGAACCAAACGTTGTACATTGTCGCTCAGTGCACAAGGGATTTGTCGAGTAGCGATTGTGGTGGGTGTTTAAGCGATGTGATTGGATCGGCGATTCCCTGGTCGCGTTTGGGAAGTGTGGGTGGAATGGTTTTGTATCCAAGTTGTTATCTCAGGTTTGACTTGTTCCAGTTTTACGCTCACTTTGACTTCCCCACGCACGCGCCAACTCAGCAACAAACAGAAAAAAGAGTAGTTCGGTCGCGAACAATTATCTGGATTACTGTTTCTACCATTGTTTCGGCTATACTTTTTTCTTCTGGCTACTACTTGAAACGAAGAAAAGGAAGAAAGAATTATAAAACCGTTCTCAAAGAAAACTTTGGACATGAAAGCACCGTTTTGGAGCCATTGCAATTCGATTTGACTACAATTGAAGCAGCAACAAATAACTTTTCACTTGAGAATAAGATTGGCAAAGGAGGATTTGGAGAAGTTTATAAGGGTATTCTTGATGATGGAAGACATATAGCTGTAAAGAGACTCTCAAAATCTTCAAAGCAAGGTGCAGAGGAGTTCAAAAATGAGATTCTTTTAATAGCCAAACTTCAACATAGAAATTTAGTGGCTTTCATAGGATTTTGCCTTGAAGAACAAGAGAAAATACTTATCTACGAATACGTGACAAATAAAAGTCTCGATTACATTTTATTTGATACTCAACAACAAAATTTGTTAAGTTGGAATGAGCGTTACAAAATTATAGGAGGAATTGCTCGAGGAATTCTTTATTTACATGAATATTCTCGACTTAAAGTTATACACCGTGATCTTAAACCTAGTAATATATTATTAGATGAAAATATGAATCCAAAAATTTCAGATTTTGGTCTTGCTAGAATTGTTGAAATAGATCAACACGAAGGAAGTACAAACAGAATTGTTGGAACATATGGCTACATGTCTCCAGAATATGCAATGCTTGGCCAATTTTCTGAGAAATCAGATGTTTTTAGTTTTGGAGTTATGATTCTAGAAATAATTACTGGAAAAAAGAATATAGCTTCTTATGATTCATCCCGTATTGCTGATGGTCTCCTAAGTTTTGTTTGGAGAGAGTGGAGGAAACAAACACCATTGAACATAGTAGACCCAAAATTGAGAGAAAATTATTCTAAATTTGAAGCCATTAAGTGCATTCAGATAGGTTTACTATGTGTTCAAGAAAATCCAGATGCTAGACCAACAATATTGGCAATTGTTTCATATCTCAGCAGTCACTCAATTGAATTACCATCTCCACAAGAGCCAGCATTTATCTTGCACAATAAAATGGATTCAAAAATAGTTACACATGAATCATGTTCTAGTCAATCTGCCAATAACTCCATACCACTCTCTGTTAATGAAATGTCTATAAGTGAATTTTATCCTCGATAG 3018 0.4016 MAVCLVGGAKRFELSFHIREYSKGREGEGEEWKDKDMDCNVSVVSSVRGKSNNGAVVGSFRREIEEGGVDSETPDDFCAWNRHRLVGTLGGSSVCRWIVQEEVRPMNSTMPSKPLDLLFFILVISFNFPITESQEAPFVFQFCPEILYTVNSTYQSNLMTLLSSLSSNAATTTFYNTTVKTPSETIYGLFMCRGDVPVNLCKQCILNATHRLSSSDSQCYLSKQAIIWYDECMVRYSSTSFFSDPQTVPEFYSWNMAKISNTSNFMNLLVDTMKQTSNCAASSPLGNRYATNEANISEIQTLYCLAQCTQDLSPQDCSNCLAKATSLLRFCCEDKQGGRVLFPSCNIRYELYPFYRVTSKQLGPVPETKYSQNDSACSQVPAYISHNCSTNENDMAFKPNRSTLLYYMSRNATNATEFQTKVGTMNGLFMCRGDMTRSLCKQCVENAIDKVSVVCDLSSEAIVWYNDCLVRYSNRSFLSRVETSPRVVKLNVTNPEAINSYSFAFTLSTKLADMANETGDSIDRYKTGTLKLNENQTLYIVAQCTRDLSSSDCGGCLSDVIGSAIPWSRLGSVGGMVLYPSCYLRFDLFQFYAHFDFPTHAPTQQQTEKRVVRSRTIIWITVSTIVSAILFSSGYYLKRRKGRKNYKTVLKENFGHESTVLEPLQFDLTTIEAATNNFSLENKIGKGGFGEVYKGILDDGRHIAVKRLSKSSKQGAEEFKNEILLIAKLQHRNLVAFIGFCLEEQEKILIYEYVTNKSLDYILFDTQQQNLLSWNERYKIIGGIARGILYLHEYSRLKVIHRDLKPSNILLDENMNPKISDFGLARIVEIDQHEGSTNRIVGTYGYMSPEYAMLGQFSEKSDVFSFGVMILEIITGKKNIASYDSSRIADGLLSFVWREWRKQTPLNIVDPKLRENYSKFEAIKCIQIGLLCVQENPDARPTILAIVSYLSSHSIELPSPQEPAFILHNKMDSKIVTHESCSSQSANNSIPLSVNEMSISEFYPR* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2241 1005 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 374 596 - -
Apr1g2241 1005 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 126 364 - -
Apr1g2241 1005 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 608 996 - -
Apr1g2241 1005 ProSiteProfiles Gnk2-homologous domain profile. 483 591 IPR002902 -
Apr1g2241 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Apr1g2241 1005 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Apr1g2241 1005 ProSiteProfiles Protein kinase domain profile. 678 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2241 1005 Gene3D - 486 591 IPR038408 -
Apr1g2241 1005 Gene3D - 135 241 IPR038408 -
Apr1g2241 1005 Gene3D - 380 477 IPR038408 -
Apr1g2241 1005 Gene3D - 249 354 IPR038408 -
Apr1g2241 1005 Pfam Salt stress response/antifungal 260 352 IPR002902 -
Apr1g2241 1005 Pfam Salt stress response/antifungal 388 474 IPR002902 -
Apr1g2241 1005 Pfam Salt stress response/antifungal 148 238 IPR002902 -
Apr1g2241 1005 Pfam Salt stress response/antifungal 504 587 IPR002902 -
Apr1g2241 1005 SMART serkin_6 678 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2241 1005 ProSitePatterns Protein kinases ATP-binding region signature. 684 706 IPR017441 GO:0005524
Apr1g2241 1005 ProSiteProfiles Gnk2-homologous domain profile. 379 477 IPR002902 -
Apr1g2241 1005 Gene3D Phosphorylase Kinase; domain 1 637 753 - -
Apr1g2241 1005 Pfam Protein kinase domain 679 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g2241 1005 CDD STKc_IRAK 684 950 - -
Apr1g2241 1005 Gene3D Transferase(Phosphotransferase) domain 1 754 961 - -
Apr1g2241 1005 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 374 596 - -
Apr1g2241 1005 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 126 364 - -
Apr1g2241 1005 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 608 996 - -
Apr1g2241 1005 ProSiteProfiles Gnk2-homologous domain profile. 247 354 IPR002902 -
Apr1g2241 1005 SUPERFAMILY Protein kinase-like (PK-like) 661 983 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2241 Apr-Chr1 31847586 31858016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2241 123 358 Receptor kinase-like Gene Family AT4G05200 38.683 4.02e-42 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr1g2241 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2241 - - aprc:113852296 2018.82