Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2233 ATGGAAGCTGAAGGCCAATGGCAAATTTCAGAGAGAGTGGTGAAAGAGATATGGTGGTCAATGGTGTTCATAGTTGCATGCAGCATGATCATAATATATGAGAAGCTTTGGCTGAGGCCACAAAGGATCAGATCAATGCTTCAGAAGCAAGGCATCAAGGGACCAAAACCTTCCTTTCCTTTTGGCAACATTTCTGAGATGCAACAAGTCCATCAGCAAGCTCCTGTGTCTATTGAGAACTTAGATGATTGGCTTCATTCCCTCTTCCCATACTTCCATAAATGGAAGCAACTCTATGGTTCAATATTCTTGTACTCCACTGGAATCAAACAGCATCTATATGTGGGGATACCCGAATTAATAAAAGGGATAGGCCTGCATAAGTCCTTGGATCTAGGCAGGCCTTCATATCTAACCAAACCATTGAAGCCTATGTTGGGTGAAGGCATCCTTAGGGCTAATGGAGTACATTGGACCTTCCAGAGGAATCTGCTTGCTCCTGAGTTTTTCCTTACCAAAATTAAGAATATGGTGGATTTAATGGAAGAATCTACCATGGAAATTATCAGAAAATGGGAAAGCTATATACGAGAAAGTGAGGGGGGAATTGCAGAGTTGGTGATTGATGGAGATCTGAAAGTTCTTACAGCGGATGTCATTTCAAAAGCTTGTTTTGGCAGCTCCTATGCTCAAGGCAATTTAATTTTTGCAAAATTGGCCACAATGCAATCTGCACTTGCAAGGCCTAGTATTCTATTTGGATTTCTAAACATAAGATTTCTTCCCACCAAGGAAAACAAAGAGACATGGAAATTGCAGAAAGAGGTGGACTCACTGATCCTGAAAGTCATCAAGGACCGTGAAGCAGAAAACCAAAAGAGTAGCACAAATGAGAATCAAAAGGATCTATTAAATATAATTCTAGAAGGTGCTGCCAATGCCACCAATAATGGTGAAAAGGGTATTTTCAAGGCAGGGTATAATGTGAACCAGTTGATTCTAGACATATGCAAAAATATTTACTTTGCAGGCTCTGAGAGCAGTGCTATTGCTGTTAGTTGGACACTGATGCTGCTGGCCTTACATCCTCATTGGCAACAACGTGTTAGATCCGAGATTATGGAAACCTACGGTAACATGTTGCCTCATTCCTTTCATGACATGGACAAACTTCGGAAGCTAAAAGCACTAACAATGGTGATTCAAGAGAGTCTACGGCTTTATGGGCCTGCAGTTACAGCCTCAAGGGAAGTGTTGGCTGAGATGAAGTTAGGTGAACATGTGCTACCTAAAGGCATAAACATGTGGTTGTTCATACCCTCATTGCACCGTGACACTGATAACTGGGGACCAGATGCTAGAGAGTTTAACCCAGAAAGGTTTGCTAGTGGTGTTTCAGCAGCTTGTAAGTATCCACAAGCTTACATACCATTTGGTCTTGGGAGCCGAATTTGCTTAGGCCAAAACTTTGCATTGCTAGAAATCAAGATTGTTCTCTCTCTTCTTCTCACCAACTTTTCCTTTTCTCTTTCACCAAACTATTGCCATTGCCCCGTTTATAAAATGTTGTTAATGCCAAAATATGGTGTAAGGCTTCTTGTTAGCAAGGTTAACAACACCTTCCCATAA 1629 0.4138 MEAEGQWQISERVVKEIWWSMVFIVACSMIIIYEKLWLRPQRIRSMLQKQGIKGPKPSFPFGNISEMQQVHQQAPVSIENLDDWLHSLFPYFHKWKQLYGSIFLYSTGIKQHLYVGIPELIKGIGLHKSLDLGRPSYLTKPLKPMLGEGILRANGVHWTFQRNLLAPEFFLTKIKNMVDLMEESTMEIIRKWESYIRESEGGIAELVIDGDLKVLTADVISKACFGSSYAQGNLIFAKLATMQSALARPSILFGFLNIRFLPTKENKETWKLQKEVDSLILKVIKDREAENQKSSTNENQKDLLNIILEGAANATNNGEKGIFKAGYNVNQLILDICKNIYFAGSESSAIAVSWTLMLLALHPHWQQRVRSEIMETYGNMLPHSFHDMDKLRKLKALTMVIQESLRLYGPAVTASREVLAEMKLGEHVLPKGINMWLFIPSLHRDTDNWGPDAREFNPERFASGVSAACKYPQAYIPFGLGSRICLGQNFALLEIKIVLSLLLTNFSFSLSPNYCHCPVYKMLLMPKYGVRLLVSKVNNTFP* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2233 542 SUPERFAMILY Cytochrome P450 83 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 532 - -
Apr1g2233 542 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS P450 superfamily signature 476 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS P450 superfamily signature 485 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS E-class P450 group I signature 475 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PRINTS E-class P450 group I signature 485 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 532 - -
Apr1g2233 542 Pfam Cytochrome P450 88 532 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr1g2233 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506|GO:0016705
Apr1g2233 542 Gene3D Cytochrome P450 37 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2233 Apr-Chr1 31770188 31775777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2233 120 534 Cytochrome P450 AT5G24900 43.468 1.19e-127 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2233 - - gmx:100801472 850.121