Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2216 ATGGCTTCAACAGTAGAGTATGATGAAGATGCTGATAACAGAGGTGGTATCTGGGTTTTGGATCAGAAGATTGACCAGCCAATGGATGAAGAAGCTGGAAGGCTAAAAAATATGTACAGAGAAAAAAAATTTTCTGCACTGTTGCTTATGCGGCTTGCATATCAGAGCCTTGGTGTAGTTTATGGAGATTTGGGCACTTCCCCCTTATACGTTTTCTATAATACTTTTCCTCGTGGAGCTAAAGATCAGGAGGATGTGATTGGAGCTCTTTCTTTGATTATTTACTCTCTTACTCTGGTTCCACTTCTCAAATATGTTCTTATTGTATTAAGAGCAAATGACAATGGTCAAGGTGGAACATTGGCTCTCTATTCCCTGCTCTGTCGACATGCAAATATAAAAACCATTCCAAACCAGCATCGTACCGATGAAGAGCTAACAACATATAGTCGCTCTACCTTCCATGAAAAGTCATTTGCTGCAAAAACCAAGAGATGGTTAGAGGAACAAGCTTTTATTAAAAATACCATTCTTATTCTTGTCCTTGTTGGTACCTGCATGGTGATTGGAGATGGGATTCTTACCCCAGCTATATCTGTTTTATCTGCTGCTGGAGGCATCAAGGTAAATCACCCTGATTTGAGTAACGGAGTAGTTGTGCTGGTTGCTGTAGTAATATTAGTTGGGCTATTCAGCATGCAACATTATGGTACAGATAGGGTTGGCTGGCTCTTTGCTCCAATTGTCCTGCTTTGGCTTCTCCTAATTGGAGGTATAGGTATATTCAACATCTGTAAACATGGCAGCAGTGTTCTGAAAGCCTTTTCACCTGTGTATATATATCGGTATCTAAGAAATGGAGGTAAAGAAGGGTGGACTTCCCTGGGTGGCATCTTGCTCAGCATAACAGGGACAGAGGCTCTTTTTGCTGACCTAGCACATTTTCCAGTCTCATCTGTACAGATTGCATTTACTCTGCTTGTGTTTCCTTGCCTTCTTCTAGCCTACTCTGGACAAGCTGCTTACCTTATGCATAACTTGAAGCATTCACAAGATGCTTTTTATCGTTCTATTCCAGAGTCCGTTCCTCTTCCAGTTCTAGATTTTGTCTTGATTGAAGACAAAATATACTGGCCAGTATTCGTTGTTGCAACAGCAGCTGCAGTAGTTGCAAGTCAGGCCACAATATCTGCAACCTTCTCAATTATTAAGCAAGCCCTTGCTCATGGTTGTTTCCCAAGAGTTAAAGTTGTACATACATCAAAGAAGTTCCTTGGTCAGATATATATTCCAGATATCAATTGGATCCTTATGATTCTTTGCATTGCTGTTACTGCTGGGTTTAAAAATCAAAGCCAGATTGGAAATGCATATGGTACTGCAGTGGTGATAGTCATGCTGGTTACTACATTGCTTATGATTTTAATCATGATATTAGTTTGGCGCTGCCATTGGATTCTTGTCATTGTGTTCACGGGCTTATCATTGATTGTGGAATGTACATACTTCTCCGCCGTACTCTTCAAAGTCGATCAAGGTGGATGGGCTCCCCTTGCAATTGCTGGAGCATTTCTTGTTATTATGTATGTTTGGCATTATGGTACAGTGAAACGCTATGAGTTTGAAATGCATAGTAAGGTCTCCATGGCATGGATTCTTGGGCTCGGGCCAAGTTTAGGACTTGTTCGTGTCCCTGGAATTGGGCTAGTTTACACAGAGCTTGCAAGTGGAGTACCCCACATCTTTTCTCATTTTATCACCAACCTACCCGCTATCCATTCTGTTGTTGTTTTTGTATGTGTGAAATATCTTCCTGTCTACACTGTCCCAGAGGAAGAACGGTTCCTTGTGAAGCGAATTGGACCTAAGAATTTCCACATGTTTCGATGCGTGGCACGATATGGATACAAAGACCTGCATAAGAAAGACGACGATTTTGAGAAAAAGCTCTTTCATAACCTTTTTGTGTTTGTTAAGCTTGAGTCTATGATGGAGGGTTGCTCAGATTCAGATGAGTACAGTTTATATGGACAGAAAACTGAGCAATCAAGAGAAGGCCTTTTGAACAACAATACAAACACTGCTTCATTGAATGTGGATTCAATTTCATCAGTGGATTCAATAGTATCAGTTAGATCTCCATCACATGCAAATGTTACTGTTCAGTCCTCTGGTCATGTAAGCAGCCATACTGAGGTTGATGAACTTGAGTTTTTAAACAATTGTAGGGATGCTGGAGTGGTTCACATACTAGGCAACACAGTTGTGAGGGCCAGGAGGGATTCAAGATTCTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAGATATGCAGGGAACATAGTGTGATCTTCAATATTCCTCACGAGAGCCTCTTAAATGTTGGACAGGTTTTCTATGTATAG 2415 0.4066 MASTVEYDEDADNRGGIWVLDQKIDQPMDEEAGRLKNMYREKKFSALLLMRLAYQSLGVVYGDLGTSPLYVFYNTFPRGAKDQEDVIGALSLIIYSLTLVPLLKYVLIVLRANDNGQGGTLALYSLLCRHANIKTIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEEQAFIKNTILILVLVGTCMVIGDGILTPAISVLSAAGGIKVNHPDLSNGVVVLVAVVILVGLFSMQHYGTDRVGWLFAPIVLLWLLLIGGIGIFNICKHGSSVLKAFSPVYIYRYLRNGGKEGWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLLVFPCLLLAYSGQAAYLMHNLKHSQDAFYRSIPESVPLPVLDFVLIEDKIYWPVFVVATAAAVVASQATISATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMILIMILVWRCHWILVIVFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFHNLFVFVKLESMMEGCSDSDEYSLYGQKTEQSREGLLNNNTNTASLNVDSISSVDSIVSVRSPSHANVTVQSSGHVSSHTEVDELEFLNNCRDAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICREHSVIFNIPHESLLNVGQVFYV* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2216 804 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 803 IPR003855 GO:0015079|GO:0016020|GO:0071805
Apr1g2216 804 Pfam K+ potassium transporter 54 638 IPR003855 GO:0015079|GO:0016020|GO:0071805
Apr1g2216 804 TIGRFAM kup: potassium uptake protein 52 804 IPR003855 GO:0015079|GO:0016020|GO:0071805
Apr1g2216 804 PANTHER POTASSIUM TRANSPORTER 2 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2216 Apr-Chr1 31592411 31601461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2216 8 804 Inorganic Solute Cotransporters AT2G35060 77.694 0.0 1233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2216 K03549 - gmx:100801093 1370.53