Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2214 ATGAATGAGAAACCTGCATGGCTAGAGAGGTTGATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACCAGAATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCTTCCCTTCTCACCGCTCTCACCCTCTCCTCCAGGTGCGAAGGTATGTTTACCACGATGTGATTCGATTAGATGACCTGGAAAAGCTCATTGATTGTTCCAATATTCAGCCCTATACTATTAACAGTGCCAAAGTAATATTCTTAAATCAGAGGCCACAATCGAGGACATGCAAAGGTCCTGCCAACGCTTGCTTCACTTGTGATAGGATTCTTCAGGAACCATTTCATTTCTGTTCTCTATCATGCAAGGTGGATTACATGGTGTACGAGGGTCAAAGCTTGTCCAGTATTTTGCATCGATTCGATGAATCTGACTTTGCAATTTCGCAGTTCGAGGGCCTAAGGGTGGATGGCTCAGAAGTAATTGATGAAGATACCCAAATTGCCCCTAGTTCCTCTTACTCCAACACTGAAGCCACCAGCAATTCTGTAATTTCACGCGAACCAAACAACATGAAGAAGGGCAAAACCAACAGGTTCCTCCCTGGGATCGTCCTCTCTCTTGGCAGCAGAAGAAAGGGTGCTCCTCATAGGGCTCCTCTCTCCTAG 687 0.4687 MNEKPAWLERLMAETFFGGCGVHQNRRKNEKNVFCLHCCLSICPHCFPSHRSHPLLQVRRYVYHDVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRTCKGPANACFTCDRILQEPFHFCSLSCKVDYMVYEGQSLSSILHRFDESDFAISQFEGLRVDGSEVIDEDTQIAPSSSYSNTEATSNSVISREPNNMKKGKTNRFLPGIVLSLGSRRKGAPHRAPLS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2214 228 MobiDBLite consensus disorder prediction 173 197 - -
Apr1g2214 228 MobiDBLite consensus disorder prediction 173 199 - -
Apr1g2214 228 Pfam PLATZ transcription factor 59 130 IPR006734 -
Apr1g2214 228 PANTHER - 5 228 - -
Apr1g2214 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2214 Apr-Chr1 31573929 31577702 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Apr1g2214 PLATZ 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2214 - - ccaj:109804478 456.447