Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2213 ATGCACTGCCAACTGAAGGACCCTCAAAACAGTCCACAAGGAGAAAATGACCTATCGCTACTTTCAAGCACCTTCCAAAGCAAAAGCAAGAACAGTGGTGCGACCACAACCACCCACTACAATCCCAAGACAAACAGCACGAAGAAAACATGGTGGCCAAACCCAAACAGAAGAAATTTGAAGAAAAGCCACATCAATTGCTGGGACTGCTCAACATCACTTGAACTTTATGACGACCCATGGAAGATCAAGAAAGTGTTGACAAAGAGTGATGTTGGGAAACTGAACAGACTCTTGTTTGGGGCAGATTTGCTTGAGAACTTGATGCTGCCCGTGCTTGGTGCCGATGCTCAAAGAGGAATGGGAACCCCCATTAGGGTTTGGGATGCTGACACCATGACCATGCACGCTCTCATTCTCAAGCGTTGGGCTTCTTTTCAGAACTTTGTTCTCATTGGAGGTTGGAACCGAAACTTTGTCAAGAGAAGGGGGTTGAAGAAAGGTGATGAAATTGGACTTCTCTGGGATTCTTCCACAGGTTGCTTCCACTTCTCCGTGCTTAAACGAACTGAGTAA 576 0.4618 MHCQLKDPQNSPQGENDLSLLSSTFQSKSKNSGATTTTHYNPKTNSTKKTWWPNPNRRNLKKSHINCWDCSTSLELYDDPWKIKKVLTKSDVGKLNRLLFGADLLENLMLPVLGADAQRGMGTPIRVWDADTMTMHALILKRWASFQNFVLIGGWNRNFVKRRGLKKGDEIGLLWDSSTGCFHFSVLKRTE* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2213 191 Gene3D - 80 190 IPR015300 -
Apr1g2213 191 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 19 189 - -
Apr1g2213 191 SUPERFAMILY DNA-binding pseudobarrel domain 79 188 IPR015300 -
Apr1g2213 191 MobiDBLite consensus disorder prediction 25 55 - -
Apr1g2213 191 CDD B3_DNA 81 188 IPR003340 GO:0003677
Apr1g2213 191 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 19 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2213 Apr-Chr1 31549116 31549803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2213 53 173 RAV Transcription Factor Family AT1G50680 28.682 4.64e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2213 - - lang:109344782 238.039