Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2187 ATGTCTAATTCTTTCCTCCCATTGCTTCTTCTTTTGGCTCTTTACATCGTTTCAGCCATAGCCCAACCTCATGAAAATTATGATGATACTGTCTTCACTCTCCAAGTCCCAACAATATATGAAACCAACTTGGACAATCTCCTATCTTTTGGTCACTACCGTGAAAGCTGTCCCCAATTCGAATCAATTCTACACAGCAAATTGATAGAATGGATTCAGAAGGACTACACTTTAGCAGCTAGTCTCCTGAGGTTGCACTTCCATGATTGCTCTGTCAGGGGATGTGATGGCTCCATTCTGTTGAACCATGATGGAAGTGAGAGGACAGCACAGGCAAGCAAGACACTGAGAGGGTTCGAAGTGGTGGATGATATAAAGGCAGAACTTGAGAAACAATGCCCAAAGACAGTGTCTTGTGCTGACATTCTAACTGCTGCTGCAAGGGATGCCACGGTTGAGTTGGGTGGACCCTATTGGGCAGTTCCTTATGGTAGGAAAGATGGCAAGGTTTCCATTGCTAAGGAAGCTGAAATGGTGCCTATGGGCCATGAAAATATTACTTCCTTGATTGAGTTTTTCCAATCCAAGGGCATGAGTGTGCTTGACTTAGTTGTTCTCTCAGGGGCTCATACTATTGGAAGGAGTTCATGTGGATCCATTCAATATAGGCTGTACAACTACCAAGGAACTGGCAAACCAGACCCAACTATAGATCCAAAGTATGTTAACTTCTTGCAAAGGAAGTGTAGATGGGCCTCAGAGTATGTGGACCTTGATGCTACAACACCGAAGACATTTGACCATGTGTACTACATAAATCTTAAGAAGAAAATGGGATTGTTATCTACTGATCAATTGTTATATGCTGATCCAAGGACTTCACCTCTTGTTTCTGCATTAAGTGCCACTCCCAATGTTTTTGAGCACCAATTTGCGGTGTCCATGGGAAAGCTTGGCATTGTTGAAGTTCTCACGGACCAGGATGAAGGAGAAATCAGGACCAACTGCAATTTTGTCAATGCTTATTGA 1029 0.4315 MSNSFLPLLLLLALYIVSAIAQPHENYDDTVFTLQVPTIYETNLDNLLSFGHYRESCPQFESILHSKLIEWIQKDYTLAASLLRLHFHDCSVRGCDGSILLNHDGSERTAQASKTLRGFEVVDDIKAELEKQCPKTVSCADILTAAARDATVELGGPYWAVPYGRKDGKVSIAKEAEMVPMGHENITSLIEFFQSKGMSVLDLVVLSGAHTIGRSSCGSIQYRLYNYQGTGKPDPTIDPKYVNFLQRKCRWASEYVDLDATTPKTFDHVYYINLKKKMGLLSTDQLLYADPRTSPLVSALSATPNVFEHQFAVSMGKLGIVEVLTDQDEGEIRTNCNFVNAY* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2187 342 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PANTHER PEROXIDASE 40 339 - -
Apr1g2187 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Apr1g2187 342 ProSiteProfiles Plant heme peroxidase family profile. 47 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 Gene3D Peroxidase, domain 2 180 318 - -
Apr1g2187 342 SUPERFAMILY Heme-dependent peroxidases 48 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 Gene3D - 51 340 - -
Apr1g2187 342 CDD secretory_peroxidase 48 339 IPR033905 GO:0004601|GO:0042744
Apr1g2187 342 PANTHER PEROXIDASE 25-RELATED 40 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 Pfam Peroxidase 66 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr1g2187 342 ProSitePatterns Peroxidases active site signature. 79 90 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2187 Apr-Chr1 31322493 31324169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2187 44 341 Peroxidase AT1G30870 60.000 4.10e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2187 K00430 - gmx:100527587 606.29