Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2164 ATGTTGAGTTCCCAACGCTTAAAATCCTTTCTCTTTCTGAAGGAACTCACAAGAGCACATTTTCCAATCCCAAAAGCGATTCCGTTTGCATCAACACTCTCTTTGAAATACAGCTCCATCACTTCAGAGCAACACTCGTTCACCGTTTCATACCTCATTAACAATTGTGCCTTCTCACCAGAAACTGCTCTCAAGGCTTCCAAGCTTGTTCGATTCGAGAACGCTGAAAAGCCCGATTCAGTAATCGCCTTCTTCAGAAACAACGGATTCACTAACGCTCAGATAAATAGCATCATAAGAAACGGACCAAACGTGCTAACATGCAACCTCCACAAAAGGGTTTTGCCAAAGTTTGAATTTTTACGCTCCAAAAGTGCTTCCAACTCTGACATCGTTGATCTTGTGAATAGCAACCCCAGAATCCTATACGCAAGCCTCGAGAACAGCATAATCCCTGCCTTTGAATCGGTGAGAAGGTTCCTTCCATCTGATAAGAAAACTATTGATTGTATAATCGCTTGTCGACATTTCTTTGGTCATGATCTTGTTGTAAAAAATGTGAGATTGTTACTTGATGATGGAATCAAGGACTCCAACATCACCTATGTGTTATGCAGAAGACCTTCTATTATATTGTCTCGTTATATGAGGAAGGACGTGGATGAAGTTAAAGAAATGGGATTTGATCCTTCCGAGTTAAATTTTGCAATAGCATTGCAGGTCAAAAGGGGTGTTTCAAAATCCCGGTGGGATGCAAAAGTTGAGGCCTTTAAGGGATGGGGATGGACTGAAGAAATGGTTCTTAATGCGTTTAGGAAGCGGCCCCTTTGTATGTTAGCATCCAAAGATAAGATCAATGAGGTGATGAAATTTTGGGTCAATGAGTTAGGTTGGAACCCTTTGGTCCTTGTTGAAAGATCAGAGATTTTTGGATATAGTTTGGAGAAAAGGATCATTCCCAGGGGTTTAGTTTTTCAGTATTTGCTTGCGAATGGTTTGATAAAAAGGAATGCCAGCTTGTCTACTCTATTTGCTATGTCTGAAAAGATGTTTCTTGAGAAGTATGTGAAATGTTTTAGGGAGGAAAAGTGTCAACTTTTAAAGTTGTACCAGGAAAAAAGAATGGTTACAGTGTTTGAGAGAAAGGAGGATGGCGCAGCATCTGGCAGTTATGAAGGGGTTAACTTATGA 1191 0.4039 MLSSQRLKSFLFLKELTRAHFPIPKAIPFASTLSLKYSSITSEQHSFTVSYLINNCAFSPETALKASKLVRFENAEKPDSVIAFFRNNGFTNAQINSIIRNGPNVLTCNLHKRVLPKFEFLRSKSASNSDIVDLVNSNPRILYASLENSIIPAFESVRRFLPSDKKTIDCIIACRHFFGHDLVVKNVRLLLDDGIKDSNITYVLCRRPSIILSRYMRKDVDEVKEMGFDPSELNFAIALQVKRGVSKSRWDAKVEAFKGWGWTEEMVLNAFRKRPLCMLASKDKINEVMKFWVNELGWNPLVLVERSEIFGYSLEKRIIPRGLVFQYLLANGLIKRNASLSTLFAMSEKMFLEKYVKCFREEKCQLLKLYQEKRMVTVFERKEDGAASGSYEGVNL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2164 396 Pfam mTERF 187 352 IPR003690 GO:0003690|GO:0006355
Apr1g2164 396 Pfam mTERF 83 275 IPR003690 GO:0003690|GO:0006355
Apr1g2164 396 SMART mt_12 201 229 IPR003690 GO:0003690|GO:0006355
Apr1g2164 396 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Apr1g2164 396 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Apr1g2164 396 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Apr1g2164 396 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Apr1g2164 396 Gene3D Transcription termination factor 3, mitochondrial 176 368 IPR038538 -
Apr1g2164 396 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 28 375 - -
Apr1g2164 396 PANTHER CGI-12 PROTEIN-RELATED 28 375 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2164 Apr-Chr1 31115823 31117211 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr1g2164 mTERF 1.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2164 K15032 - gmx:102666739 432.18