Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2155 ATGCTTAGTCCGGAAGCTGAACTTAAAATAAGTTTTGGCTATCAATGCAATAGCAGTAGAGGTATACCTTGCAAGGCTTCCAATGGCTGCAAAATCCTTCCTGAAATCCGTAGAGCAAGCAGTTTCACTTGCTTATCCGGTGCTGGCTTAAGCGCAAATGCTACACTAGCCAACACGAACATCTGCAATGGTGTGATAGGAGAAGAAATCCTTCCATGTTTGGACTCTCCTAAGTCATTTCGTAAGGTACCCTCCTCGCCAAGTCTTCCAAAGTTGGAAATATTATCATCTTCTATCCATAGTATCTTGTCAAACCTAAGTTGCAGCCCATCCACCCCAAGTAATATGCTTGAATATGACCCTTGTGCATTACAATCCATGAGTCCACCTTCCAGAAGTGACGGTTTTCTTAATGCCGTGGAAGTTCAAGTTGCTGGAGGAGCTGCAGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGATGGCTCTTCTGTGGAATTTATGATGGCTTTAATGGGAGAGATGCAGCCGACTTTCTTGCTGGTACCCTTTATGACACTATCGCGTCTTATTTTAATATGTTACACTGGGATTCGGAACCTGATTCCATTAATGCTTCTAACAATGTGGGTATGGGTGGATCCTTTCAATATAATTTGGATGATAGTCTTATTCTTCAGGAACATCAATCTCCATCAATGTTTAATGGAAACGACAATTCTAGTATTGGTTGTTATGCAAACGGTACTCCACCTGCCAAGTCCAAAGCATCACATAAATCATTTTCTCATACTGTCCTTGATGGCCTCCAACATGTTCTTAATCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAGCGCCCTGATTTAGTTTCTGTTGGATCTTGTGTTCTACTTGTGCTTCTTCATGGTGATGATTTGTATACACTTAATCTAGGCGACAGCAGAGCAGTGTTGGCAACACGCAACACAGACGGAAGAATGAATGAGAATGAGATATTGAAGGCTATTCAGCTTACAGATAATCATACTGTAGACAATGAAGCGGAAAGAGCTCGGCTTCTTGCCAGTCATCCTGATGATCCTAAAACCATTGTAGCAGGGAAAGTGAAAGGAAAATTGAAGGTTACCCGTGCTTTTGGAGTTGGCTACCTGAAAAAGAAAAATCTGAATGATGCACTGATGGGAATTCTTCGAGTTCGTGATCTTAAAAGCCCGCCATATATTTATACTGATCCATCGCTGAATGTGCATAAAATCTCAAACTCTGATCAATTTGTTATAGTTGCGAGTGATGGTTTATTTGACTTCTTCTGCAATGATGAAGCAGTAAAGCTTGTGGGGTCTTATATCTTGAACAATCCTTCGGGTGATCCAGCAAAATTTCTTATTGAGCAACTAGTGGCAAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATTAATGTTCCAGATGGGAGAAGGAGGAAGTACCATGATGATGTGACTGTAATTGTGATAATCCTTGGGATGAATCACCGGACTTCAAAGGCATCAACTTGCATCTAG 1575 0.414 MLSPEAELKISFGYQCNSSRGIPCKASNGCKILPEIRRASSFTCLSGAGLSANATLANTNICNGVIGEEILPCLDSPKSFRKVPSSPSLPKLEILSSSIHSILSNLSCSPSTPSNMLEYDPCALQSMSPPSRSDGFLNAVEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLAGTLYDTIASYFNMLHWDSEPDSINASNNVGMGGSFQYNLDDSLILQEHQSPSMFNGNDNSSIGCYANGTPPAKSKASHKSFSHTVLDGLQHVLNQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGDDLYTLNLGDSRAVLATRNTDGRMNENEILKAIQLTDNHTVDNEAERARLLASHPDDPKTIVAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLKSPPYIYTDPSLNVHKISNSDQFVIVASDGLFDFFCNDEAVKLVGSYILNNPSGDPAKFLIEQLVARAADSAGFSMEELINVPDGRRRKYHDDVTVIVIILGMNHRTSKASTCI* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2155 524 PANTHER PROTEIN PHOSPHATASE 2C 2 523 IPR015655 GO:0004722|GO:0006470
Apr1g2155 524 Pfam Protein phosphatase 2C 248 465 IPR001932 -
Apr1g2155 524 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 523 - -
Apr1g2155 524 CDD PP2Cc 149 511 IPR001932 -
Apr1g2155 524 ProSiteProfiles PPM-type phosphatase domain profile. 136 511 IPR001932 -
Apr1g2155 524 SUPERFAMILY PP2C-like 149 511 IPR036457 -
Apr1g2155 524 Gene3D - 120 520 IPR036457 -
Apr1g2155 524 SMART PP2C_4 127 509 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2155 Apr-Chr1 31025323 31029026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2155 4 524 PP2C-type Phosphatase Gene Family AT3G16560 60.342 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2155 - - gmx:100791404 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2155 1 31025323 31029026 Apr1g2155 1 31025323 31029026 ECH
Apr9g2235 9 30225437 30229629 Apr1g2155 1 31025323 31029026 PCT