Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2151 ATGGTGATGGAGGATTCTGTGGCGCAGAAGAGTAAACAGCGAGAGTTCGCTTTGGCATCGGTGTGTGAGGTGTCTTCGGTTTCTTCTTCTGCTTCGCCGGGGGTTGCGCTCTTCACCGGTGAACGTCTTCAAATTCAGGATGAATCTCAGGAGATTGCTCTAAATGCTGATCTTCCACCTATTCAGCTATTCAGATTAAGTCCTGTCAAATGGGTTTGCCTGGTGGAAGGGACTGATGCTGGCAAACAGACATCATATTCCAGGGGAGTCGCTATACAATTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGCGGAAACTTGCCAAATGGAACTTATGTAATAACATCTAAAAGCAAATTTGATGAAAAAATAGAGTCATCGTCCGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCAGTTATTGAGAATCGTGCTGATTTCATAGGTCGTGTAGTAGTTGATGTTGGAGCTGGTAGTGGTATTTTGTCACTATTTGCTGCTCAGGCTGGTGCGAAGCATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACAAAAACTTATAGCTGGGAACCCAATACTGGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACCCTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACCTCTAATGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCACCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTCTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACGCCCTTGCATGGGACTGCGTTTCAAGGATATTTTTCTCAGCCTGTGGTGGATGCCTTTGATCCAAGGTTATTAATAGCTGCTCCTATGTTCCATGTGATAGACTTCACCAAAATAAAGGAAGAAGAGCTGTATGAAATTGACATTCCTCTAAGATTCACAGCCACTGTGGGTGCCAGAGTACATGGATTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCGAAGGTGGCTTACCACTGCCCCCGGTTCACCTACAACCCACTGGTATCAGTTACGATGTGTTCTCTCGCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGGATGCACCTGATTGCCCACAATGCTCAGAGTTACACAATATATTTAACATTGTCAGCTAAAATGTGGGGGCCTGGTGCTGAACAAGGAGGAACTCTTCAAACATCATCGTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCTCAGCCGCAAGCTTATGCATTAGCCCAAGATCAGCAACCTCAACCACTTTTACAGTCACAGGATATACACATTCAATCTCAGGATTTGGATGATACTGAGATAATGCAACAGCCTTCGCCTAATTCATGTGCTCAGATTGACTCCCTCATGCAGAATGCATAA 1617 0.428 MVMEDSVAQKSKQREFALASVCEVSSVSSSASPGVALFTGERLQIQDESQEIALNADLPPIQLFRLSPVKWVCLVEGTDAGKQTSYSRGVAIQFRNEEESEAFHCVFQQWKKEFNVQGGNLPNGTYVITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFIGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYAQKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTSNGKMFPTVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVIDFTKIKEEELYEIDIPLRFTATVGARVHGLACWFDVLFNGSTVRRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRMHLIAHNAQSYTIYLTLSAKMWGPGAEQGGTLQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLLQSQDIHIQSQDLDDTEIMQQPSPNSCAQIDSLMQNA* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2151 538 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 461 IPR029063 -
Apr1g2151 538 CDD AdoMet_MTases 185 262 - -
Apr1g2151 538 Gene3D - 288 496 - -
Apr1g2151 538 Gene3D Vaccinia Virus protein VP39 126 286 IPR029063 -
Apr1g2151 538 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 139 454 IPR025799 GO:0016274|GO:0018216
Apr1g2151 538 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 3 494 - -
Apr1g2151 538 Pfam Ribosomal protein L11 methyltransferase (PrmA) 182 255 - -
Apr1g2151 538 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3 494 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2151 Apr-Chr1 30991221 30999249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2151 146 436 C2H2 Transcription Factor Family AT3G12270 32.595 4.29e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2151 K05931 - gmx:100818828 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2151 1 30991221 30999249 Apr1g2151 1 30991221 30999249 ECH
Apr9g2240 9 30247984 30254882 Apr1g2151 1 30991221 30999249 PCT