Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2149 ATGAGTGTAACATCATACCCCATATCATATCATTTGAACTTGAACATGTCTTCTTCTCTTTCCTGGCTCACCTCACCCTCATGTTCCCCTTTGGCCATAGATTCATCTTCTTCTTCTTCTTCACAACTCTTAGCTCAGTGGTTAAGGTTTATCTTCCTATCTCCATGTCCTCAGAGACTTATTCTTTCTGCTATTGATTTTATCTTTTTGGTCTTCCTATTAGCCTTTGCAGCTCAAAAACTCTATTCTCGGTTCACTTCCAATGTGAACTCTACCTCCACCGTCACCAAACCCCTTTTGCAAGAAAAGGATTCTGACTACAAAGTTACCTTGTGGTTCAAACTATCCTTCTTGGTGACCACCCTTTTGGCCGTAGCTTACACGGTTCTAGGCATCTTGGCTCTCACACAAAGCAACCTTGCTTCATGGAAACTGATAGAGGCACAGTTTCGGTTCTTCCAAGCCGTAGCCTACATAGTGATAGTGATTCTATTGGTTCACGAGAAGAAGTTCAAAGCTTCAAAGCACCCTTTATCATTAAGAATCTATTGGACAGCAAACTTGGCGATTGCTTGCTTGTTTGCTGCTTCAGCCATTGTTCGAATGGTAACTGTTGATGAAACAAGATTGGAGCTTAGTTTGAGAGTGGATGACATATTCTCATTGATTAATCTTCCATTATCTTTGTTCCTTTTCATAGTATCCATTACAGGGTCATCAGGGATTCAAGTAATCAGAATATCTGATGTAGTAGGAAGGACAAATCAGTGGCTTTCCAGCGATAGAAATTTGAGTCCTTATGCCTATGCCCCGTTTTTCTCCAAAGTAGTGTGGTTTTGGATGAACCCTTTGCTGAGTAAAGGGTACAAATCACCCCTCAAGCTTGACGATGTTCCTACACTTCCTCCAGGGTTTCGAGCTGAGAAGATGTCCGAAATCTTCCAAGGCAATTGGCCAAAGCCAGAGGAAAACAGCAAGCACCCAGTTGGACTCGCATTGTTTAGGTGCTTCTGGAAACACATAGTCTTCACAGGCTTGCTTGCATCTATGAAGCTTGCAGTTATGTACGTTGGTCCAACGCTTATTCAGAGTTTTGTTGACTACACCTCGATGAAAAACAGCACTCCCAGTGAAGGTGTTTATCTGATAGCTATCCTGTTTTTGGCAAAATCAGTTGAAGTCCTAAGTGTACACCAATTCAATTTCCACTCGCAGAAACTAGGCATGCTCATTCGTTCCAGCATCATAACATCAGTCTACAAAAAGGCTTTGAGGTTGTCAAGTTCTTCAAGACAAGCTCATGGAACTGGCCAGATTGTGAACCACATGGCTGTTGATGCACAGCAACTCTCAGATTTGATGATGCAGTTTCACCCCATATGGATGATGCCATTGCAAGTTGGTGCAGCTTTGGCCCTTATCTATAGCTGTGTTGGCTTGTCTGTGCTTGCAGCACTTCTTGGAACTACCGTGGTTTTTCTCTTCACTCTATTTCGCACCAAGAAGACCAATACCTTCCAGTTCAGGATTATGAAGAGCCGTGACTTGAGGATGAAGGCAACAAATGAGTTGCTTAACAACATGCGTGTGATTAAGTTTCAAGCATGGGAGGAGTATTTTGGCAACAAAATTGCGGAGTTTCGCAAAGCCGAGCATGGTTGGATTGGCAAGTTCTTGTACTATTTTGCAATTAACATGGGGATTTTGTCCACTGCTCCCTTGACGATAACTGTTCTTACATTTGGAAGTGCAACTTTGATGGGGATTCGTTTGAATCCTGGCACTGTGTTCACAATAACTTCAGTGATCAAGATTCTGCAAGAGCCTGTGAGGACTTTCCCTCAGGCTCTTATGTTGATTTCTCAAGCATTGATCTCTCTTGGGAGGTTGGATGAGTTCATGATGAGTAAGGAAATGGATGACAATGCAGTGAAGAGAGAGGATAGTTGTAATGGTGACATAGCTTTGGAGATAAAAGATGGCAAGTTCTCGTGGGATGATAAGGATGGGAACGTGGCTCTTAGTGTTGATGAGTTGGTACTTAAGAAAGGGGACCATGCTGCAATTGTAGGAACTGTTGGGTCAGGCAAGTCTTCTTTGTTGGCTTCTGTGTTAGGGGAAATGTTCAAGATCTCAGGAAAGGTCAGAGTTTGTGGGAAAATTGCCTATGTAGCACAGACATCATGGATTCAGAATGCAACCATCCAAGATAACATATTGTTTGGTTTACCAATGAACAGAGAGAAGTACAGGGAAGTTATTAAAGCATGCTGCCTGGAAAAAGATCTTGAAATGATGGACTATGGAGACCAGACTGAGATTGGAGAACGGGGTATTAACCTCAGTGGTGGCCAGAAGCAACGTGTACAACTTGCTAGAGCTGTGTACCATGACTGTGACATTTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCACAAACAGGATCATATATTTTTAAGGAATGTATCATGGGAGCTCTCAAAAATAAGACAATTTTACTTGTTACCCACCAAGTTGACTTCTTGCATAACGTTGACTCTATAATGGTGATGCGAGATGGAAGAATAGTGCAAAATGGAAAGTATGATGAACTTCTCAAGGCTGGTCTGGATTTTGGTGCACTTGTGGCTGCACATGAATCCTCAATTGATATTGCAGAAACAAGTGATGAAGTTGGTGTTTCTTCTGCTCAGTCTCCAAAATTGGCTCGTATTCCTTCAAAAGAAAAGGAAAGCAATGGCGAAATGCAGGCTCAAGATGAATCTAAGTCTGATAAGACTAAAGCAAATCTCATTGAAGAAGAGGAAAGAGAAACAGGCCGTGTGAACCTTCAAGTGTATAAACATTATTTCACTGAAGCATTTGGGTGGTGGGGTGTTGCACTCATGCTGGGAATGTCTCTAACTTGGATTATATCTTTTTTGATTGGTGATTACTGGCTAGCAATTGGAACTGCAGAAGATTCTGGCGTTTCTCCTCCTACATTCATTATTGTCTATGCTGTGATAGCAGTTGTTGTTTGTATTGTGGTCATGTGCAGATCACTCCTATTTACATATTGGGGTCTGAAGACATCTCAAAGCTTCTTCACTGGAATGCTTCAAAGCATCTTGCATGCACCAATGTCATTCTTTGACACCACTCCTTCTGGCAGAATTTTGAGTCGAGTATCGACAGATATACTTTGGCTTGATATATCAATTCCAATGTTAACAAACTTCGTAATGGTCGCTTACTTCTCATTAATCAGCATCCTCTTTGTCACATGCCAAACTGCTTGGGAGACTGTCTTCCTCTTAATTCCACTGTTTTGGCTGAATAACTTTTATCGGAAATACTTCCTTGCATCTTCTAGGGAACTGACTCGACTTGATTCTATCACAAAAGCTCCTGTGATACATCACTTTTCAGAAACCCTTGCTGGTGTTATGACAATCCGTGGCTTCAGAAAGCAGAGCGCATTTTCTCAGGAAAATATTGACAGAGTCAATGCAAGTCTACGGATGGATTTCCACAACAATGGTGCTAATGAATGGCTTGGTTTTCGCTTGGACTATATGGGAGTTATTTTCCTTTGCATATCCACTATTTTTATGATCTTTTTGCCAAGTGCTATCGTGAAGCCAGAATATGTTGGTTTGTCTTTGTCCTATGGCCTGGCTCTCAGTAGTCTCTTGTCATTTACCATATCTATGACTTGCTCTGTTGAGAACAAAATGGTTTCTGTTGAGAGAATAAAACAGTTCACCAACCTTACGCCAGAAGCTCCATGGAAAATTGCTGATAGGACTCCTCCTGAGAATTGGCCCAGTCAAGGCAGTATTGAGTTGAATAATTTGCAGGTACGGTATCGACCAAATACTCCTCTAATTCTGAAGGGAATATCTCTCAACATTGAAGGAGGAGAAAAGATTGGTGTTGTTGGGCGTACAGGAAGTGGGAAATCAACCCTTATCCAGGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGAAGATAATTGTTGATGGGATCAATATTTGCACTGTGGGCCTTCATGATCTTAGGTCTCGACTTGGAATTATTCCTCAAGAGCCTGTCCTCTTTCAAGGAACAGTAAGAAGCAACATTGACCCTCTTGGACTGTATTCAGAAGAAGAAATTTGGAAGAGCCTTGAACGCTGCCAACTGAAAGAAGTTGTGGCTTCAAAGCCTGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGGCAATTGCTATGCTTGGGAAGGATCATGCTAAAACGCAGCAAAATACTATTCATGGATGAAGCTACAGCATCCGTTGATTCACAAACTGATGCTTTGATACAAAAGATCATTCGTGAGGACTTTGCAGAGCGTACAATTATCAGCATTGCTCATAGAATACCAACAGTCATGGATTGTGACAGGGTTTTGGTCATTGATGGAGGTTTTGCAAAGGAATTTGACAAGCCATCACGTTTGCTAGAAAAGCCTTCACTTTTTGGGGCATTGGTTAAGGAATACTCCAATAGATCAGCTTAA 4551 0.4184 MSVTSYPISYHLNLNMSSSLSWLTSPSCSPLAIDSSSSSSSQLLAQWLRFIFLSPCPQRLILSAIDFIFLVFLLAFAAQKLYSRFTSNVNSTSTVTKPLLQEKDSDYKVTLWFKLSFLVTTLLAVAYTVLGILALTQSNLASWKLIEAQFRFFQAVAYIVIVILLVHEKKFKASKHPLSLRIYWTANLAIACLFAASAIVRMVTVDETRLELSLRVDDIFSLINLPLSLFLFIVSITGSSGIQVIRISDVVGRTNQWLSSDRNLSPYAYAPFFSKVVWFWMNPLLSKGYKSPLKLDDVPTLPPGFRAEKMSEIFQGNWPKPEENSKHPVGLALFRCFWKHIVFTGLLASMKLAVMYVGPTLIQSFVDYTSMKNSTPSEGVYLIAILFLAKSVEVLSVHQFNFHSQKLGMLIRSSIITSVYKKALRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWMMPLQVGAALALIYSCVGLSVLAALLGTTVVFLFTLFRTKKTNTFQFRIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIAEFRKAEHGWIGKFLYYFAINMGILSTAPLTITVLTFGSATLMGIRLNPGTVFTITSVIKILQEPVRTFPQALMLISQALISLGRLDEFMMSKEMDDNAVKREDSCNGDIALEIKDGKFSWDDKDGNVALSVDELVLKKGDHAAIVGTVGSGKSSLLASVLGEMFKISGKVRVCGKIAYVAQTSWIQNATIQDNILFGLPMNREKYREVIKACCLEKDLEMMDYGDQTEIGERGINLSGGQKQRVQLARAVYHDCDIYLLDDVFSAVDAQTGSYIFKECIMGALKNKTILLVTHQVDFLHNVDSIMVMRDGRIVQNGKYDELLKAGLDFGALVAAHESSIDIAETSDEVGVSSAQSPKLARIPSKEKESNGEMQAQDESKSDKTKANLIEEEERETGRVNLQVYKHYFTEAFGWWGVALMLGMSLTWIISFLIGDYWLAIGTAEDSGVSPPTFIIVYAVIAVVVCIVVMCRSLLFTYWGLKTSQSFFTGMLQSILHAPMSFFDTTPSGRILSRVSTDILWLDISIPMLTNFVMVAYFSLISILFVTCQTAWETVFLLIPLFWLNNFYRKYFLASSRELTRLDSITKAPVIHHFSETLAGVMTIRGFRKQSAFSQENIDRVNASLRMDFHNNGANEWLGFRLDYMGVIFLCISTIFMIFLPSAIVKPEYVGLSLSYGLALSSLLSFTISMTCSVENKMVSVERIKQFTNLTPEAPWKIADRTPPENWPSQGSIELNNLQVRYRPNTPLILKGISLNIEGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIIVDGINICTVGLHDLRSRLGIIPQEPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKEVVASKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDALIQKIIREDFAERTIISIAHRIPTVMDCDRVLVIDGGFAKEFDKPSRLLEKPSLFGALVKEYSNRSA* 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2149 1516 Gene3D - 1260 1508 IPR027417 -
Apr1g2149 1516 CDD ABC_6TM_ABCC_D2 957 1251 IPR044726 GO:0140359
Apr1g2149 1516 Gene3D ABC transporter type 1, transmembrane domain 923 1257 IPR036640 GO:0005524|GO:0016021
Apr1g2149 1516 Gene3D ABC transporter type 1, transmembrane domain 328 640 IPR036640 GO:0005524|GO:0016021
Apr1g2149 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1267 1509 IPR027417 -
Apr1g2149 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 653 875 IPR027417 -
Apr1g2149 1516 MobiDBLite consensus disorder prediction 895 935 - -
Apr1g2149 1516 ProSitePatterns ABC transporters family signature. 781 795 IPR017871 GO:0005524
Apr1g2149 1516 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 353 622 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr1g2149 1516 Pfam ABC transporter 679 807 IPR003439 GO:0005524
Apr1g2149 1516 Pfam ABC transporter 1293 1441 IPR003439 GO:0005524
Apr1g2149 1516 Gene3D - 651 882 IPR027417 -
Apr1g2149 1516 SMART AAA_5 683 864 IPR003593 -
Apr1g2149 1516 SMART AAA_5 1302 1486 IPR003593 -
Apr1g2149 1516 CDD ABCC_MRP_domain2 1274 1494 - -
Apr1g2149 1516 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 76 1516 - -
Apr1g2149 1516 MobiDBLite consensus disorder prediction 905 935 - -
Apr1g2149 1516 SUPERFAMILY ABC transporter transmembrane region 331 634 IPR036640 GO:0005524|GO:0016021
Apr1g2149 1516 CDD ABCC_MRP_domain1 656 856 - -
Apr1g2149 1516 SUPERFAMILY ABC transporter transmembrane region 956 1256 IPR036640 GO:0005524|GO:0016021
Apr1g2149 1516 CDD ABC_6TM_ABCC_D1 343 630 IPR044746 GO:0140359
Apr1g2149 1516 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1276 1510 IPR003439 GO:0005524
Apr1g2149 1516 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 76 1516 - -
Apr1g2149 1516 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 656 879 IPR003439 GO:0005524
Apr1g2149 1516 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 958 1239 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr1g2149 1516 Pfam ABC transporter transmembrane region 981 1203 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr1g2149 1516 Pfam ABC transporter transmembrane region 345 610 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2149 Apr-Chr1 30966932 30975820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2149 648 905 Calmodulin-binding Proteins AT2G36910 28.470 5.36e-21 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2149 - K05665 gmx:100780167 2444.85