Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2147 ATGCCGCAGGGCAATGCCGCCGCCGCCGCCGCCGCCGCTCTCTTGGACCACGCCGCCGATGCCGGCGACGCCGTCATGGCGCGGTGGTTGCAGTCTGCCGGCTTGCAGCATCTTGCCTCTCCCCTCGCTTCCACCGCCATCGATCATCGACTCCTCCCCAACCTTCTCATGCAGGGTTATGGAGCTCAGTCTGCTGAAGAGAAGCAGAGGCTTTTAAAGTTGATGAGAAACCTCAATTTTAATGGGGAATCTGGTTCAGAGCCATATACTCCCACTGCCCAAACTTTAGGTGGAGTGGCTGCGTCCGATGGGTTTTATTCTCCTGATTTCAGGGGTGATTTTGGAGCCGGGCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTGATTTCAGAACCTTTTGAGCCATCACCCTTCATGCCTGGTGATACTAGAGTATTTGAAGACGATTTCAATCCAATAAACAGCAAGGAAAGTGGGGAAGCAGATCCTGATGCATCAATTTCCTTACCCATGAATGAAAAAGAGAATAGCACCAGGGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAAGAGCTTGCTAAGAAGGAGGATGACATTGTAACTGTATCTGACAATGCATATTTGACAGTCCATGAACCCAAACTAAAGGTTGATTTGACGGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTGCTTGATGAACATGTTACCAACGATGAAGTATACGGAACTACAGTTGAGCCAATCATTCCTACAATTTTTCAGCGAACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACTATGCAACCTTTACCACTCAGAGCTGCGGAAGACCTTGTTCGGCAGTTGCATCAGCCAGTTTATCGGAATCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATACGGGGGAAAGCTTTTTGATCTTCTTAGTGACAGAAAGAAACTGTGTATGAGGGAGGATGGACGGCAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAAATTGTCAAAGAATTCATTGAAAAGGGAAATGCTGCAAGAAGTACAGGATCCACTGGTGCTAATGAGGAGTCTTCCAGGTCACATGCTATCTTACAACTGGCTGTAAAGAAGCACAATGAAGTGAAAGAGAACAAGCGGAACAATGATGGGAATGAGGCAAGAAATGGGAAGGTTGTGGGGAAAATTTCTTTTATTGATCTTGCTGGAAGCGAACGAGGTGCTGACACTACTGATAATGATCGACAGACACGGATTGAAGGAGCAGAAATTAATAAGAGCCTTCTGGCATTGAAGGAGTGCATTCGTGCTTTAGATAATGACCAGATCCATATTCCATTTCGGGGAAGCAAACTTACAGAAGTGCTTCGTGACTCCTTTGTGGGTAATTCAAAGACTGTTATGATCTCTTGTATATCTCCAGGTGCTGGGTCTTGTGAACACACACTTAATACCTTGAGATACGCAGATCGGGTTAAAAGTCTATCCAAAAGTGGTAATCCTAGAAAGGATCAGGTCCCAAATCCTGTACCACAAACTAACAAGGAGGTTTCATCTGCATCATCCCTTCCAGCTAGTTCTGGTGCAGAAGACTTTAATGATCAACGTCTAGAGAAAGCAATGGATATGGGCAGGAAATTTGTTGAAAAGGAAAATTCTTTGTACAGCTCTACTGCTTCTGTTGACAAACAGCCATTGAATTTTTCTTCAAATTACCCATTAAATGGGCGAGAGGAAAAAGGTTTGGCTTCTGGTTCAATGGACAGGGAGAGGTTCGAACTGAAGAGCTCTCACAATGACTCTACCAGTCAAAAGATGAACTCCTATTCACAAAGTGATACAGATGAGAAAGTGCAAAAAGTGTCTCCCCCACGCAGAAAAGGGTCCAAGGATGAAAGGTCTGAAAGGCCTGCAAACTGGATGAAAAGGGATGCCAACGGTTCTGATCTCTTCACTACAAGCTCCAAGCAGCAGAGCACAGGGACTTATAACACTCTGTCTAAGGATGAAAAGTCTGAAAGGCCTACAAACTGGATGAAAAAAGATTCCAATGGTTCTGATCTCCTCAGTACAAGCTCCAAGCAGCAGAGCACAGGGAATTATAGCACTGTGTCTAAGGATGAAAAGTCTGAAAGGGCTACAAACTGGTTGAAAAGGGATGCCAATGGTTCTGATCTCTTCACTACAAGCTCCAAGCAGCAGAGCACAGGGAGTTACAGCACTGCATCAAAGGATGAAATCTCTGAAAGACCTGCAAACTGGATGAAAAGGGAAGCCAACGGCTCTGATCACTTCACTACAAGCTTGAAGCAGCGGAGCGCAGGGAATTATAACACTGTTACCACAGGATCCAGGCTTTATGAAGCAGAATCTTCTCCTGATGGGAATATAAGTGCAGTTCTTGAGGAGGAAGAAGCACTAATTGCTGCTCATCGGAAAGAAATTGAGGATACAATGGAGATTGTTCGTGAAGAAATGAAACTTTTGGCAGAAGTTGACCAACCGGGAAGCCTTATTGATAACTATGTAACCCAATTAAGCTTTGTACTTTCGCGCAAAGCGGCTAGTCTAGTGGGTCTTCAAGCTCGCCTTGCAAGATTTCAACATCGACTAAAAGAACAAGAAATTCTAAGTGGGAAAAGAGTTCCCCGTTAA 2745 0.4426 MPQGNAAAAAAAALLDHAADAGDAVMARWLQSAGLQHLASPLASTAIDHRLLPNLLMQGYGAQSAEEKQRLLKLMRNLNFNGESGSEPYTPTAQTLGGVAASDGFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGDTRVFEDDFNPINSKESGEADPDASISLPMNEKENSTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVSDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEHVTNDEVYGTTVEPIIPTIFQRTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLAVKKHNEVKENKRNNDGNEARNGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDQVPNPVPQTNKEVSSASSLPASSGAEDFNDQRLEKAMDMGRKFVEKENSLYSSTASVDKQPLNFSSNYPLNGREEKGLASGSMDRERFELKSSHNDSTSQKMNSYSQSDTDEKVQKVSPPRRKGSKDERSERPANWMKRDANGSDLFTTSSKQQSTGTYNTLSKDEKSERPTNWMKKDSNGSDLLSTSSKQQSTGNYSTVSKDEKSERATNWLKRDANGSDLFTTSSKQQSTGSYSTASKDEISERPANWMKREANGSDHFTTSLKQRSAGNYNTVTTGSRLYEAESSPDGNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSGKRVPR* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2147 914 Coils Coil 831 862 - -
Apr1g2147 914 MobiDBLite consensus disorder prediction 586 604 - -
Apr1g2147 914 MobiDBLite consensus disorder prediction 529 559 - -
Apr1g2147 914 ProSiteProfiles Kinesin motor domain profile. 191 525 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g2147 914 MobiDBLite consensus disorder prediction 648 672 - -
Apr1g2147 914 PANTHER KINESIN-LIKE PROTEIN 736 771 - -
Apr1g2147 914 PANTHER KINESIN-LIKE PROTEIN 773 913 - -
Apr1g2147 914 PANTHER KINESIN-LIKE PROTEIN 1 663 - -
Apr1g2147 914 PANTHER KINESIN-LIKE PROTEIN 697 735 - -
Apr1g2147 914 PANTHER KINESIN-LIKE PROTEIN 660 696 - -
Apr1g2147 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 525 IPR027417 -
Apr1g2147 914 MobiDBLite consensus disorder prediction 612 628 - -
Apr1g2147 914 MobiDBLite consensus disorder prediction 751 777 - -
Apr1g2147 914 MobiDBLite consensus disorder prediction 525 563 - -
Apr1g2147 914 MobiDBLite consensus disorder prediction 157 184 - -
Apr1g2147 914 CDD KISc_KIF2_like 191 523 - -
Apr1g2147 914 Coils Coil 887 907 - -
Apr1g2147 914 SMART kinesin_4 189 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g2147 914 MobiDBLite consensus disorder prediction 711 734 - -
Apr1g2147 914 MobiDBLite consensus disorder prediction 676 696 - -
Apr1g2147 914 PANTHER KINESIN-RELATED PROTEIN 6 1 663 - -
Apr1g2147 914 PANTHER KINESIN-RELATED PROTEIN 6 660 696 - -
Apr1g2147 914 PANTHER KINESIN-RELATED PROTEIN 6 736 771 - -
Apr1g2147 914 PANTHER KINESIN-RELATED PROTEIN 6 773 913 - -
Apr1g2147 914 PANTHER KINESIN-RELATED PROTEIN 6 697 735 - -
Apr1g2147 914 MobiDBLite consensus disorder prediction 586 787 - -
Apr1g2147 914 PRINTS Kinesin heavy chain signature 272 293 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g2147 914 PRINTS Kinesin heavy chain signature 382 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g2147 914 PRINTS Kinesin heavy chain signature 425 443 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g2147 914 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g2147 914 Gene3D Kinesin motor domain 171 528 IPR036961 -
Apr1g2147 914 MobiDBLite consensus disorder prediction 629 647 - -
Apr1g2147 914 Pfam Kinesin motor domain 197 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr1g2147 914 ProSitePatterns Kinesin motor domain signature. 424 435 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2147 Apr-Chr1 30950553 30958233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2147 177 525 Calmodulin-binding Proteins AT5G65930 33.241 9.73e-41 160