Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2120 ATGGTTCTTTTTCCATCTCTTGTCAATGGATTGACAAGAACTGTGTCATTGAAGAAAGAGAAGAGTGGTAGAAAGGATGCTGGAAGGAAAGCTGTGGAAGCATTGGAAAAGGAAGCAAGGAAGAATGAATTGTTGATTAGTTCATCTGGAATTGTTAGGTCTTTCAAGGCCAACAATTTTGCTTCCTTGTTCACTAAGAAGGGCCAGAAAGGAGTCAATCAGGATTGCCTTATTGTTTGGGAGGAATTTGGTTGCCAAGAAGACATCATCTTCTGTGGAATTTTTGATGGGCATGGTGCTTGGGGACACTTGGTGGCCAAAAGAGTCAGGAAACTACTACCTGCTTCCTTGCTATGCAATTGGCAGGAAAATCTGGCTGCAACATCACTTGACCTGGATTTTAAGATGGAAGCAGACAGGAACCTTCAGAGATATGACATATGGAAGCAGTCCTACATAAAAGCTTGTGCTTCCATTGACCAAGATCTAAAGCAGCATACTGAGATTAATTCCTTTCAAAGTGGTACTACAGCTTTGACAATTATCAAACAGGGTGAACATCTCATTATAGGAAACGTTGGTGACTGTAGAGCTGTTTTGGCGACCACTTTAGGGGATGGCACATTAACTACGCTTCAGCTTACCACTGACATGAAGCCAAATTTACCAAAGGAGGCAGAGCGCATAATGCAATGTAAAGGGCAAGTATTTTGCATGGGAGATGAACCAGGAGTGTACAGGGTTTGGATGCCTAATGGCAAGTCCCCGGGACTAGCAATATCTAGAGCATTTGGTGACTACTGTTTAAAGGATTTTGGACTCATTTCTGTCCCAGATGTCACACAAAGAAAACTAACCACCAGGGACCAATTTGTCATCTTGGCTACAGATGGTGTATGGGATGTTATTTCCAACGAAGAAGCAGTGAAAATTGTTGGTTCAGCGCCACATAAAGAAAAAGCAGCTGAAAGGCTGGTGAACTACGCCACACATGAATGGAAACGTAAGAGAAGAGGCATTGCTATCGATGATATATCAGTTATTTGCCTCTTCTTTCACTCTTCTCACCACTAA 1074 0.4236 MVLFPSLVNGLTRTVSLKKEKSGRKDAGRKAVEALEKEARKNELLISSSGIVRSFKANNFASLFTKKGQKGVNQDCLIVWEEFGCQEDIIFCGIFDGHGAWGHLVAKRVRKLLPASLLCNWQENLAATSLDLDFKMEADRNLQRYDIWKQSYIKACASIDQDLKQHTEINSFQSGTTALTIIKQGEHLIIGNVGDCRAVLATTLGDGTLTTLQLTTDMKPNLPKEAERIMQCKGQVFCMGDEPGVYRVWMPNGKSPGLAISRAFGDYCLKDFGLISVPDVTQRKLTTRDQFVILATDGVWDVISNEEAVKIVGSAPHKEKAAERLVNYATHEWKRKRRGIAIDDISVICLFFHSSHH* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2120 357 CDD PP2Cc 59 352 IPR001932 -
Apr1g2120 357 SMART PP2C_4 51 350 IPR001932 -
Apr1g2120 357 SUPERFAMILY PP2C-like 52 353 IPR036457 -
Apr1g2120 357 Gene3D - 52 355 IPR036457 -
Apr1g2120 357 PANTHER ALPHABET, ISOFORM E-RELATED 1 356 - -
Apr1g2120 357 Pfam Protein phosphatase 2C 84 330 IPR001932 -
Apr1g2120 357 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Apr1g2120 357 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2120 Apr-Chr1 30663131 30667282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2120 1 353 PP2C-type Phosphatase Gene Family AT3G05640 58.028 5.64e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2120 - - gmx:100814087 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2120 1 30663131 30667282 Apr1g2120 1 30663131 30667282 ECH